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The map label for this gene is yjgF [H]

Identifier: 218930600

GI number: 218930600

Start: 3998123

End: 3998509

Strand: Direct

Name: yjgF [H]

Synonym: YPO3590

Alternate gene names: 218930600

Gene position: 3998123-3998509 (Clockwise)

Preceding gene: 218930599

Following gene: 218930601

Centisome position: 85.91

GC content: 48.32

Gene sequence:

>387_bases
ATGTTACGTGCTATCAAAACTAAACTCGCCCCTGCTGCCATTGGCCCTTATGTTCAAGGTGTCGATCTGGGCAGCATGAT
CATGACTTCCGGTCAGATCCCGATCGATCCAAAAACCGGCTTAGTCGCTGATGATATTGCCGCTCAGGCTCGTCAGTCAC
TGGAAAACGTGAAAGCCATTGTTGAAGCGGCTGGCCTGAAAGTTGCCGATATCGTGAAAACCACCGTATTCGTTAAAGAT
CTGAATGATTTCAGTATCGTTAACGCAACTTACGAAGCCTTCTTTACAGAACACAGCGCCCCGTTCCCAGCCCGTTCTTG
TGTTGAAGTGGCCCGTTTACCCAAAGATGTAAAAATCGAAATCGAAGCCATCGCCGTACGTCGTTAA

Upstream 100 bases:

>100_bases
GGCTAACTTCGCCCCACGGGTTGCTGTAATTCAGTTCGCCTTTATAATGGTCGGGATCATTATGATATCCCTTTCCGCAT
TACGTAAATCAGGAGTCAAG

Downstream 100 bases:

>100_bases
TCCCTCCCCCATCACCGCATACGGCGGGTTATCGCCAGCCGCATGTGGTGATTTTATTTCTCTCCGCTCTGTCTCTCTCT
TCCCATTCCATGACCGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLRAIKTKLAPAAIGPYVQGVDLGSMIMTSGQIPIDPKTGLVADDIAAQARQSLENVKAIVEAAGLKVADIVKTTVFVKD
LNDFSIVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIEIEAIAVRR

Sequences:

>Translated_128_residues
MLRAIKTKLAPAAIGPYVQGVDLGSMIMTSGQIPIDPKTGLVADDIAAQARQSLENVKAIVEAAGLKVADIVKTTVFVKD
LNDFSIVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIEIEAIAVRR
>Mature_128_residues
MLRAIKTKLAPAAIGPYVQGVDLGSMIMTSGQIPIDPKTGLVADDIAAQARQSLENVKAIVEAAGLKVADIVKTTVFVKD
LNDFSIVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIEIEAIAVRR

Specific function: May have a phosphotransferase activity [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=126, Percent_Identity=46.8253968253968, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI87082396, Length=128, Percent_Identity=84.375, Blast_Score=220, Evalue=2e-59,
Organism=Escherichia coli, GI87082213, Length=127, Percent_Identity=67.7165354330709, Blast_Score=181, Evalue=1e-47,
Organism=Escherichia coli, GI1787245, Length=115, Percent_Identity=31.304347826087, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982075, Length=122, Percent_Identity=42.6229508196721, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI25148896, Length=122, Percent_Identity=42.6229508196721, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71982068, Length=122, Percent_Identity=42.6229508196721, Blast_Score=107, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6322138, Length=127, Percent_Identity=39.3700787401575, Blast_Score=94, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6320899, Length=106, Percent_Identity=41.5094339622642, Blast_Score=90, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19921376, Length=125, Percent_Identity=41.6, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13738; Mature: 13738

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAIKTKLAPAAIGPYVQGVDLGSMIMTSGQIPIDPKTGLVADDIAAQARQSLENVKAI
CCCHHHHHCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VEAAGLKVADIVKTTVFVKDLNDFSIVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIE
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEE
IEAIAVRR
EEEEEECC
>Mature Secondary Structure
MLRAIKTKLAPAAIGPYVQGVDLGSMIMTSGQIPIDPKTGLVADDIAAQARQSLENVKAI
CCCHHHHHCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VEAAGLKVADIVKTTVFVKDLNDFSIVNATYEAFFTEHSAPFPARSCVEVARLPKDVKIE
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEE
IEAIAVRR
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]