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The map label for this gene is yrbA [H]

Identifier: 218930582

GI number: 218930582

Start: 3983677

End: 3983940

Strand: Reverse

Name: yrbA [H]

Synonym: YPO3570

Alternate gene names: 218930582

Gene position: 3983940-3983677 (Counterclockwise)

Preceding gene: 218930583

Following gene: 218930581

Centisome position: 85.61

GC content: 44.7

Gene sequence:

>264_bases
ATGAATCTTATGGATACTAACGAAATTAAAGACGTGCTGATGAATGCATTGGCATTGCAGGAAGCTCATGTTACCGGTGA
CGGTAGCCACTTTCAGGTGATTGTAGTGGGTGAGTTATTTGCCGACATGAACCGAGTGAAGAAACAGCAGGCTGTTTACG
CGCCATTGATGGAATATATCGCCGATAACCGTATCCATGCCTTATCCATTAAGGCCTATACGCCACAAGAATGGCAGCGG
GATCGCAAACTAAATGGCTTTTAA

Upstream 100 bases:

>100_bases
AGCTCCTGTGCATAATGGCATCACAGGGGCTTTTCTTTAGTTTCAGAGCTTGCCGTATTCCACTAATATGTTTGCCTGAT
TATGATCCTCTTAAAATAGA

Downstream 100 bases:

>100_bases
GGCTGTTGGCTAAACGCTGTTTACTGTGATGGTAATTTACTGTAGTAGTCATTTACTGTGGTAGTCATTTACCGTTAGCA
GTAAACAGTGGCTGAGGCGG

Product: BolA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MNLMDTNEIKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQAVYAPLMEYIADNRIHALSIKAYTPQEWQR
DRKLNGF

Sequences:

>Translated_87_residues
MNLMDTNEIKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQAVYAPLMEYIADNRIHALSIKAYTPQEWQR
DRKLNGF
>Mature_87_residues
MNLMDTNEIKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQAVYAPLMEYIADNRIHALSIKAYTPQEWQR
DRKLNGF

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=84, Percent_Identity=80.9523809523809, Blast_Score=149, Evalue=5e-38,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9963; Mature: 9963

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLMDTNEIKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQAVYAPLMEYI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ADNRIHALSIKAYTPQEWQRDRKLNGF
HCCCEEEEEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure
MNLMDTNEIKDVLMNALALQEAHVTGDGSHFQVIVVGELFADMNRVKKQQAVYAPLMEYI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ADNRIHALSIKAYTPQEWQRDRKLNGF
HCCCEEEEEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]