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The map label for this gene is yhcC [H]

Identifier: 218930568

GI number: 218930568

Start: 3965388

End: 3966311

Strand: Reverse

Name: yhcC [H]

Synonym: YPO3556

Alternate gene names: 218930568

Gene position: 3966311-3965388 (Counterclockwise)

Preceding gene: 218930572

Following gene: 218930567

Centisome position: 85.23

GC content: 50.87

Gene sequence:

>924_bases
ATGCAGTTACAGCAATTAGTCAATATGTTTGGTGCGGACTTACAGCGCCGTTATGGTGAAAAAATTCATAAACTCACGCT
GCATGGCGGGTTCAGTTGTCCGAATCGTGATGGAACTCTGGGGCGTGGTGGTTGTACTTTTTGTCAGGTTGCCTCCTTTG
CTGATGAGCAAATGCAGCAACAAAGTATCACTCAGCAACTCGCGATACAGGCCAAAAAAGCCAATCGAGCGAATCGTTAC
CTGGCTTATTTTCAGGCCTATACCAGTACTTATGCAGAGGTGAATGCGTTAGCTGCAATGTATCAACAGGCATTGTGTGA
GGCCGATATTGTGGGCCTGTGCGTGGGGACTCGCCCGGATTGTGTGCCCGATGCCGTTCTGGATTTGCTGAGCAGTTATC
AACAACAAGGTTATGAAGTTTGGCTCGAGCTGGGTCTACAAACAGCTAATGATAAAACACTCAAACGTATTAACCGTGGA
CATGATTTTGCCTGCTACCAGCAAACGGCCCGCCGTGCTCGCGCTCGTGGCCTGAAAGTGTGTTGCCATTTAATTGTGGG
TTTACCAGGAGAGGATCGGGCGCAGGGGAGGGAAACCTTGGAAAAAGTGGTCACCACCGGTGTTGATGGGATAAAACTGC
ATCCACTGCATATCGTGGAAGGCAGTACGATGGCGAAAGCCTGGCGGGCGGGGCGCTTAACGGCGTTGGCGTTGGAGGAT
TATGTCCTCACCGCAGGTGAAATGATTCGCCATACACCCGCAGAGGTTGTCTATCATCGGATTTCTGCCAGTGCGCGTCG
CCCTACATTGCTGGCCCCCTTGTGGTGTGAGAATCGTTGGACAGGCATGAATGAGCTGAATAATTACCTACTCCAGCATG
GCGTACAGGGCACCGCGATTGGGGATGCTTATTGCTATCGTTAA

Upstream 100 bases:

>100_bases
CTGACTTAATTCAGATCTGCAGGATTTCGTTCGTTTGCTGCTTGGCCGCAACGCCAATGGCTTTGGGTATGGGCTCTTTT
TGACAGGCAGTGCCAAGATC

Downstream 100 bases:

>100_bases
GATACTTATCGTAATAGCTAAGAGAGTAATCGCCATGGTTAACAGACTTATTGCTATGGCTAAAATACTCATTATTACCG
TTGGAGGGGATATCTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQMQQQSITQQLAIQAKKANRANRY
LAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINRG
HDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALED
YVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGTAIGDAYCYR

Sequences:

>Translated_307_residues
MQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQMQQQSITQQLAIQAKKANRANRY
LAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINRG
HDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALED
YVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGTAIGDAYCYR
>Mature_307_residues
MQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQMQQQSITQQLAIQAKKANRANRY
LAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINRG
HDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALED
YVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGTAIGDAYCYR

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=304, Percent_Identity=77.9605263157895, Blast_Score=502, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34215; Mature: 34215

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQMQQ
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
CVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
CCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALED
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECEEEEECCCHHHHHHHCCCEEEEEHHH
YVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGTAI
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEE
GDAYCYR
CCHHCCC
>Mature Secondary Structure
MQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQMQQ
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
CVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
CCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHIVEGSTMAKAWRAGRLTALALED
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECEEEEECCCHHHHHHHCCCEEEEEHHH
YVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGTAI
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEE
GDAYCYR
CCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]