| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930548
Identifier: 218930548
GI number: 218930548
Start: 3946669
End: 3947124
Strand: Direct
Name: 218930548
Synonym: YPO3534
Alternate gene names: NA
Gene position: 3946669-3947124 (Clockwise)
Preceding gene: 218930547
Following gene: 218930555
Centisome position: 84.81
GC content: 45.18
Gene sequence:
>456_bases ATGATGAAATATCAATTATCCTTTGTGTTACTACTCACGCCATTGGCCGTATTTGCTGAACAGCATTGTCCGGCAATTGA TGCGATTAAGCTGATCGGAGGCGTTTATACGGCGAAGGCGACTAGTGGCGAAGAGTGGGTTGGTATCTTACAAGGGCCAC TTCCCCAAGAGAGCGGTATTAAGCGTTTCAGTGAGGCGCTCTTCGTGGTTGAAGGTGAGAACAATGGAAACAACGTCACC GGGTCAGGAAAGTTTCAAAAATGCACTTATGATTTGCAAGCCGAAAACATACAGCTCGATATGTACTATGGCGGTACAAC CTGGATAGCATCCATCCGTGGGAAACCATACTGGGAATATGAAAAAGGGGGCTTTTTTGAAATTTACACCTGCTCAAATG TGGCACCTGAATACTGCAAATTTGATATTTTAGTGCCAGGGTCAGCATCTCGATGA
Upstream 100 bases:
>100_bases TTCTTTATTATTGTCACTCTCACTCGTTCAAATTAGGTTATTTCTTGGATAGTTATCGCTATCTGCAGGCAGATAACCGT ATTTATAAGGAGAGAGAGTA
Downstream 100 bases:
>100_bases TACCGATAACCAAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCATATGCGCCTATAAGGCTCTGTTACCAGCCGCG CCCTAACAGGCGCATCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MMKYQLSFVLLLTPLAVFAEQHCPAIDAIKLIGGVYTAKATSGEEWVGILQGPLPQESGIKRFSEALFVVEGENNGNNVT GSGKFQKCTYDLQAENIQLDMYYGGTTWIASIRGKPYWEYEKGGFFEIYTCSNVAPEYCKFDILVPGSASR
Sequences:
>Translated_151_residues MMKYQLSFVLLLTPLAVFAEQHCPAIDAIKLIGGVYTAKATSGEEWVGILQGPLPQESGIKRFSEALFVVEGENNGNNVT GSGKFQKCTYDLQAENIQLDMYYGGTTWIASIRGKPYWEYEKGGFFEIYTCSNVAPEYCKFDILVPGSASR >Mature_151_residues MMKYQLSFVLLLTPLAVFAEQHCPAIDAIKLIGGVYTAKATSGEEWVGILQGPLPQESGIKRFSEALFVVEGENNGNNVT GSGKFQKCTYDLQAENIQLDMYYGGTTWIASIRGKPYWEYEKGGFFEIYTCSNVAPEYCKFDILVPGSASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16728; Mature: 16728
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKYQLSFVLLLTPLAVFAEQHCPAIDAIKLIGGVYTAKATSGEEWVGILQGPLPQESGI CCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCHHHH KRFSEALFVVEGENNGNNVTGSGKFQKCTYDLQAENIQLDMYYGGTTWIASIRGKPYWEY HHHHCEEEEEECCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEEEEECCCCCCEEE EKGGFFEIYTCSNVAPEYCKFDILVPGSASR CCCCEEEEEEECCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MMKYQLSFVLLLTPLAVFAEQHCPAIDAIKLIGGVYTAKATSGEEWVGILQGPLPQESGI CCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCHHHH KRFSEALFVVEGENNGNNVTGSGKFQKCTYDLQAENIQLDMYYGGTTWIASIRGKPYWEY HHHHCEEEEEECCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEEEEECCCCCCEEE EKGGFFEIYTCSNVAPEYCKFDILVPGSASR CCCCEEEEEEECCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA