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The map label for this gene is rimP [H]

Identifier: 218930512

GI number: 218930512

Start: 3908334

End: 3908786

Strand: Reverse

Name: rimP [H]

Synonym: YPO3498

Alternate gene names: 218930512

Gene position: 3908786-3908334 (Counterclockwise)

Preceding gene: 218930513

Following gene: 218930511

Centisome position: 83.99

GC content: 46.8

Gene sequence:

>453_bases
TTGTCCACATTAGAACAAAAGTTAACAGAGATAATTTCAGCACCGGTTGAAGCTTTAGGCTACGAATTAGTTGGCATCGA
ATTCATCCGGGGGCGCCAATCGACGCTACGAATTTATATTGATAGTGACGACGGGATCACTGTTGATGCTTGTGCTGATG
TCAGCCACCAGGTCAGCGCAGTATTGGACGTAGAAGATCCGATTACGGTCGCTTACAACTTAGAAGTTTCCTCTCCTGGC
CTTGATCGCCCAATGTTCACGGCTGAACATTATACTCGTTACCTCGGCGAAGAGGTCACTTTGGTTTTGCGGATGGCAAT
GCAGAATCGCCGTAAATGGCAGGGTATTATTAAAGCCGTTGATGGCGAAATGATCACGGTTACTGTGGATGGAAAAGATG
AAGTGTTCGCGCTGAGCAACATCCAGAAAGCGAACCTGGTACCCCACTTTTAA

Upstream 100 bases:

>100_bases
AGGGTCCAGTTGCATAAAGCCCCGAATTTCGGGGTTTTTTGTTATTTGACAGCAGAATCACTGGGCTATTAAGCCCTTTT
TTTATGTCTTGGGGGTGGGC

Downstream 100 bases:

>100_bases
AGTTTGGATGAGGCAACTAGGATGAACAAAGAGATTCTGGCTGTTGTAGAAGCAGTTTCCAATGAGAAATCCCTTCCGCG
CGAGAAGATTTTTGAGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDGITVDACADVSHQVSAVLDVEDPITVAYNLEVSSPG
LDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEVFALSNIQKANLVPHF

Sequences:

>Translated_150_residues
MSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDGITVDACADVSHQVSAVLDVEDPITVAYNLEVSSPG
LDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEVFALSNIQKANLVPHF
>Mature_149_residues
STLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDGITVDACADVSHQVSAVLDVEDPITVAYNLEVSSPGL
DRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAVDGEMITVTVDGKDEVFALSNIQKANLVPHF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=90.6666666666667, Blast_Score=287, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 16701; Mature: 16570

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDGITVDACADVSHQVSA
CCHHHHHHHHHHHCCHHHHCEEEEEEEEECCCCEEEEEEEECCCCEEEEHHCCCCHHEEE
VLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAV
EEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGEMITVTVDGKDEVFALSNIQKANLVPHF
CCCEEEEEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
STLEQKLTEIISAPVEALGYELVGIEFIRGRQSTLRIYIDSDDGITVDACADVSHQVSA
CHHHHHHHHHHHCCHHHHCEEEEEEEEECCCCEEEEEEEECCCCEEEEHHCCCCHHEEE
VLDVEDPITVAYNLEVSSPGLDRPMFTAEHYTRYLGEEVTLVLRMAMQNRRKWQGIIKAV
EEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGEMITVTVDGKDEVFALSNIQKANLVPHF
CCCEEEEEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA