| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930487
Identifier: 218930487
GI number: 218930487
Start: 3879512
End: 3880738
Strand: Direct
Name: 218930487
Synonym: YPO3473
Alternate gene names: NA
Gene position: 3879512-3880738 (Clockwise)
Preceding gene: 218930479
Following gene: 218930488
Centisome position: 83.36
GC content: 44.42
Gene sequence:
>1227_bases GTGATGATGCTAAACTCTGGTGCTAAAAACCTATTACTGACTATTCTGTTGGGTACATCTCCCTTTATTTATGCTGCAGA AAGTCATCCGTTGTTATTAAAAATGGACGATATTAACTACAGCATTGAACAGATTAAACAAAACAACCCGTTATATGAAA AATCTTATAAAAATCTGATGGCTAAGGCCGACAAGGCACTAAAAAAACCACTGTACTCCGTCATGGATAAAAGCCTCTTG GCCGCCAGTGGTGATAAACACGACTATTACAGCTTCCCACCTTATTGGTGGCCAGATCCAAGCAAGAAAGACGGTATGCC TTATTTACGTAAGGATGGGGAAACAAATCCTGCGGCCAACAGTGATGCCACCGATAAAAAGCGCATGAACAGCTTCAGTG AAGACGTCTATTATCTGGCGTTGGCTTATAGCTTTACCGGTAAGCCTGAGTATGCCCAAAAAGCGCATGAACAATTGGTC AATTGGTTCGTGAATCCAGAGACTAAAATGAATCCAAATCTGCAATATGCGCAGGCCATTCCGGGGATTAACGAAGGCCG AGGTATTGGTTTGATCGATAGCCGGGCGCTAGTTGATGTGATTGATGCCGTTGAATTGATCAGACCCGCCAATGTTCTCA GTGACAACGACTATCAGGCCATTAAAAGTTGGTATGGTGATTTTTATCAATGGATGACCACCAGCCAAAATGGTTTCGAA GAAGATAACTGGCACAATAACCACGGCACCTATTTTGATATGCAGGCGGCCTCTTTTGCCCTGTTCAGCGATCAAAAAGC CGCTGCACAGAAACGTTTGGAAATCACGCAATTACGCCGTATTCCCTCACATTTTGATATGCAAGGCCGACAAAATGCCG AGCTGGAGCGCACCCGCCCATGGCATTACAGTAACTTCCATCTAGAGGCCTACAATAAATTGGGCCGTCTTGGGGAGGTT GGCGAGAAAGATATCTGGGATTTCAGTCTGGATGAGCACAGCCTGAAAAAAGGCTATCAGTACGTTGCCGGTTTCATCAA TACCGACCAAGCCTGGCCGTATAAAGATCTGGATGGAGTACAGGATAAAAAAGCCTTGGTCAATATGATTACCGCCGCTC GCGCCTACCCTGCTGACGTTGAATTCCAACAAAAAGCACAATACCTGATAGCAAAATACCCAGATACCGTTGAAATCTTA CTTTACCCAATCACAACGCAAAAATAA
Upstream 100 bases:
>100_bases ACATTATAAATAAGCACAATTTTTATTTAAAAAATGAGTGTTCAATATATTAAATTAATAATTTTTTATTTACACCGTTT AATCCATAAAAATAAGGAAA
Downstream 100 bases:
>100_bases GCATCGCCGAGGACACGCCAGATATGAAGCAGTTTACGGATCGGCAGATGGTTAAAATCCGCCAGCGCGTTGTGAAACAA CCGGAGATTATTGCCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MMMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLL AASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLV NWFVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFE EDNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEV GEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEIL LYPITTQK
Sequences:
>Translated_408_residues MMMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLL AASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLV NWFVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFE EDNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEV GEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEIL LYPITTQK >Mature_408_residues MMMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLL AASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLV NWFVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFE EDNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEV GEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEIL LYPITTQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46870; Mature: 46870
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLM CCEECCCCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHH AKADKALKKPLYSVMDKSLLAASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC SDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNWFVNPETKMNPNLQYAQAI CCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHC PGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFE CCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC EDNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRP CCCCCCCCCCEEEECHHHEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC WHYSNFHLEAYNKLGRLGEVGEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGV CCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC QDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLYPITTQK HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC >Mature Secondary Structure MMMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLM CCEECCCCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHH AKADKALKKPLYSVMDKSLLAASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCC SDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNWFVNPETKMNPNLQYAQAI CCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHC PGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFE CCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC EDNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRP CCCCCCCCCCEEEECHHHEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC WHYSNFHLEAYNKLGRLGEVGEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGV CCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC QDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLYPITTQK HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA