| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218930482
Identifier: 218930482
GI number: 218930482
Start: 3873604
End: 3874770
Strand: Reverse
Name: 218930482
Synonym: YPO3468
Alternate gene names: NA
Gene position: 3874770-3873604 (Counterclockwise)
Preceding gene: 218930483
Following gene: 218930481
Centisome position: 83.26
GC content: 52.44
Gene sequence:
>1167_bases ATGACGCCAATAAAAACGGCAGTGACAGCAATGAAACTATACACATTGGATGTTAACTGCCTGATCAAAGCTAAGGCGAT ATTGCAGCAGCCTTTTTCACCTCTGCAACCGGCGTTACGTCGGTTATTGAGTGAAGCGGATATATTGCGCGATCAGTCGC CTGAAAGTGTCACCCACAAGACGTTACTGCCTGTCAGTGGTGATATTCACGATTACTATAGTTTTGGCACTTATTGGTGG CCTAACCCGCGCAAGCCTAACGGTTTGCCCTATGTGCGTCGCGACGGGCATACCAACCCGCAGAGCCAGAACGATGATAC GGATACTCAGCGTATCGCACGGATGTGTGACCGCTGTTTGACACTGGGGCTGGCCTACTATTTTACCGGCAATAGCCGCT ATGCACAGGTCGCGGCAGAACAGATCCGTTGCTGGTTTTTGGATGCCAAAACCCGCATGAATCCGCATCTCAATTACGGC CAGGCCATTCCTGGGATTGTGTCCGGGCGCGGCACGGGCTTAATTGATACTCGCATGATGTGGATGGTGATCGACACCCT GGGCCTGATATCACCGGCCAAATTGTTGGATACAGAAGATACGGCGGTATTGCAGCAGTGGTTCCGCGACTTTAACCACT GGATGTTCCACAGCGAAGTGGGCCATTCTGAATATGTCTGGCATAACAATCACGGCACTTGGTATGACGTCCAGCGTGCG GCTAATGCCATGTTCTACGGCGATCGTGGGCTGGTAACCACCATTATCCGTCAAGGGATCACGCAACGATTGGCGGCACA GATTGCGCAAGACGGTAAGCAGTGGATGGAATTGGAGCGCACCGTGCCTTTCCATTACTCCTTGTTTAATATGGAGGCCC ATTTACTGCTGTGCCGCTACGGGGAACATATAGAGATTGATCGCTGGGAATGGGTACAGGACGGTCGTAATGTTCAGCAG GGGGTTGATTATCTGTTGCCGTTTATTGCTGAACCGGAACTGTGGCCTTACCGTGACTTGCGCGGTATTGATTATGACAG CGCATTGCGGCTGCTCTTGCAGGCGGCACGGGGCTACCCCCAGGATGCCAAACGTTATCAAGCCGTCTTAGCCACTTTCC CGGCCGAGACTCTGACATCCCGTGATCGCCTGTTGTGGCAAAGTTGA
Upstream 100 bases:
>100_bases AAACGGTCTATCTGCAACCTAAGCTTGCGGGTATCCATATCTTTGATGCTGCTACGGGGTTGCGGGTTGACTGCCAGGCG GCATAAGGGAGGCCATATTC
Downstream 100 bases:
>100_bases ATGTGGCAAAGTTGAAAGAGGGAAAATTGGCAGGTCAGATCAAATAGTAGAAGAAAATTTCATGTACACTGAACGCTGTT TTTACGCCGGAGAGTGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHKTLLPVSGDIHDYYSFGTYWW PNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCLTLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYG QAIPGIVSGRGTGLIDTRMMWMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRYGEHIEIDRWEWVQDGRNVQQ GVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYPQDAKRYQAVLATFPAETLTSRDRLLWQS
Sequences:
>Translated_388_residues MTPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHKTLLPVSGDIHDYYSFGTYWW PNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCLTLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYG QAIPGIVSGRGTGLIDTRMMWMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRYGEHIEIDRWEWVQDGRNVQQ GVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYPQDAKRYQAVLATFPAETLTSRDRLLWQS >Mature_387_residues TPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHKTLLPVSGDIHDYYSFGTYWWP NPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCLTLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYGQ AIPGIVSGRGTGLIDTRMMWMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRAA NAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRYGEHIEIDRWEWVQDGRNVQQG VDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYPQDAKRYQAVLATFPAETLTSRDRLLWQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44932; Mature: 44800
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHK CCCHHHHHHHHHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH TLLPVSGDIHDYYSFGTYWWPNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCL EECCCCCCHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH TLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYGQAIPGIVSGRGTGLIDTRMM HHHHHEEEECCCHHHHHHHHHHHEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH WMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHCCCCCCEEEECCCCCEEEHHHH ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRY HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEC GEHIEIDRWEWVQDGRNVQQGVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYP CCCEECCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCC QDAKRYQAVLATFPAETLTSRDRLLWQS HHHHHHHHHHHHCCHHHHCCHHHHCCCC >Mature Secondary Structure TPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHK CCHHHHHHHHHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH TLLPVSGDIHDYYSFGTYWWPNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCL EECCCCCCHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH TLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYGQAIPGIVSGRGTGLIDTRMM HHHHHEEEECCCHHHHHHHHHHHEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH WMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHCCCCCCEEEECCCCCEEEHHHH ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRY HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEC GEHIEIDRWEWVQDGRNVQQGVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYP CCCEECCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCC QDAKRYQAVLATFPAETLTSRDRLLWQS HHHHHHHHHHHHCCHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA