| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is pheC [H]
Identifier: 218930361
GI number: 218930361
Start: 3730412
End: 3731182
Strand: Direct
Name: pheC [H]
Synonym: YPO3343
Alternate gene names: 218930361
Gene position: 3730412-3731182 (Clockwise)
Preceding gene: 218930360
Following gene: 218930362
Centisome position: 80.16
GC content: 43.32
Gene sequence:
>771_bases ATGCAGATGAAAAAATTATCTTTGGGAATAATGGTATTGGCATTAATCAGTAGCCAACACGTATTAGCAAAAAATTGGCA GGAAATTAAGCAAAGTGGTGAGCTGCGTATTGGGGTGCCAGGTGACTATGCGCCTTTAGCTTTCCATGATAAACAGGGCC AATTGATCGGCTACGATGTTGATATGGCAAACGCCTTTGGTGAAGACCTTAAATTGAAGGTTAATTTTGTTTCGACCAGT TGGCCAACTCTTTCAGACGATTTGGCGGCAGATAAATTTGATATTGCCATGGGGGGCGTCACAGCAACGCCCGGCAGAGA AGCGCAATTTGCTTTATCCCACGCCGTCGTGAAAAATGGGAAAATTGCGCTGACCCATTGCCAGAAAGTCAATAAATTCC CCACGCTTGATGCGATTGATCGTCAAAACGTCAAAGTTATTGTCAACCCTGGCGGTACCAACCAATCGTTTGTTGATGCA AATATTAAGCAAGCGCAAATCATCCGAACCAAAGATAACGTTGCTAACCTGCAAGGTATACGTAATAAAAGTGCAGATAT TATGTTCACTGACTTAATCGAAGGCGATTATTATCAGAGCAAAGAACCTGGCGTATTTTGTGTCGCCACCCCAGAGGTTT TAGCCGGAACGGGCAGCTACAAAGTTTATATGATGGCTAAGGATAATCAGCCGTTGTTAGAAGAAGTTAACCAGTGGCTG GCCGGGAAGACCAAAACCTTATTAGCACAAAAGTGGAATATTTCTGAGTAG
Upstream 100 bases:
>100_bases GAAAGTTTGACCGGGGAATATATTCCTCATTCCTGAGCAATATACAGTAGGATAATTTACCCTGATTGACCTTAATGGGC TCTTATAAAAAATAACAGGA
Downstream 100 bases:
>100_bases CCAGTAAGAGGCGATGGCCGTTTATTACAGCACTCTTCGCTTAGTAAACGGTCTGCCCGATATCATCTTCAATAGTCACC ACAAAAAAACAGAAAAATAC
Product: putative extracellular solute-binding protein
Products: NA
Alternate protein names: Prephenate dehydratase; Arogenate dehydratase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MQMKKLSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYDVDMANAFGEDLKLKVNFVSTS WPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAVVKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFVDA NIKQAQIIRTKDNVANLQGIRNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVLAGTGSYKVYMMAKDNQPLLEEVNQWL AGKTKTLLAQKWNISE
Sequences:
>Translated_256_residues MQMKKLSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYDVDMANAFGEDLKLKVNFVSTS WPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAVVKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFVDA NIKQAQIIRTKDNVANLQGIRNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVLAGTGSYKVYMMAKDNQPLLEEVNQWL AGKTKTLLAQKWNISE >Mature_256_residues MQMKKLSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYDVDMANAFGEDLKLKVNFVSTS WPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAVVKNGKIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFVDA NIKQAQIIRTKDNVANLQGIRNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVLAGTGSYKVYMMAKDNQPLLEEVNQWL AGKTKTLLAQKWNISE
Specific function: Forms alternative pathway for phenylalanine biosynthesis. Can catalyze two reactions:prephenate dehydratase and arogenate dehydratase. May have a role in chemotaxis or transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=255, Percent_Identity=24.7058823529412, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: =4.2.1.51; =4.2.1.91 [H]
Molecular weight: Translated: 28116; Mature: 28116
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMKKLSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYDV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEEEC DMANAFGEDLKLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAVVKNG HHHHHCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHCCC KIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFVDANIKQAQIIRTKDNVANLQGI CEEEEEHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCCHHHHHHC RNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVLAGTGSYKVYMMAKDNQPLLEEVNQWL CCCCCCEEEEEEECCCCCCCCCCCEEEEECHHHHCCCCCEEEEEEECCCCHHHHHHHHHH AGKTKTLLAQKWNISE CCCHHEEEEECCCCCC >Mature Secondary Structure MQMKKLSLGIMVLALISSQHVLAKNWQEIKQSGELRIGVPGDYAPLAFHDKQGQLIGYDV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEEEC DMANAFGEDLKLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAVVKNG HHHHHCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCEECCCCCCHHHHHHHHHHCCC KIALTHCQKVNKFPTLDAIDRQNVKVIVNPGGTNQSFVDANIKQAQIIRTKDNVANLQGI CEEEEEHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCEEEEEECCCCHHHHHHC RNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVLAGTGSYKVYMMAKDNQPLLEEVNQWL CCCCCCEEEEEEECCCCCCCCCCCEEEEECHHHHCCCCCEEEEEEECCCCHHHHHHHHHH AGKTKTLLAQKWNISE CCCHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1733946; 10984043; 8515238; 7604006 [H]