Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218930089
Identifier: 218930089
GI number: 218930089
Start: 3399827
End: 3400411
Strand: Direct
Name: 218930089
Synonym: YPO3044
Alternate gene names: NA
Gene position: 3399827-3400411 (Clockwise)
Preceding gene: 218930088
Following gene: 218930090
Centisome position: 73.06
GC content: 39.49
Gene sequence:
>585_bases ATGGCTAATATTTATGAGAGAAATATCCCTGAACGTATAGCTACATTTATCCAATTTGCAGAAAAGAACCCGGACTTCTC CACAATATTCATCGTGACGTCATCCGATGATGAAGGGTTAACTTATTGGATAGATTCATATGATGAAAATGGTGCAGATC ATCATATAGCCAAAAGAGACCTCATTCAGTTCTGCGAGGCCGATATGGGGGGCAGTCATTTTTGTTTTTGGGATGATGGG CAAGGGAAATCGTTAGATGAAATGCCTGTTGTCGTCGCCGGAAATGAAGGGGATTTCCCGATAGTGGCCCGCAATTTTGA TGAGCTATTAAGCCTGATGTCTCTAGGTGAAGAGTTATATCTTCATGGCGATGAGGCATCATGTTGTAATTTTGATGGAA GTACGCAAGAACCTGAATTCTTCGAATTTCTCACCTTCCTTGAAAAAACACTCAATATTACGCCACTAAAAACAGCCGAC GAAGGAAATGCTATTATTACTCAAGCAAGATTAGCATTTCTTGATGAATTTAATTTATGGGTTAACAAAGCCTTAAAGGG TGTTGACTCAGAGAACCAAAAATAA
Upstream 100 bases:
>100_bases CCTCTGGGATTAGCTACGCATATTCACCTGAATCACTGATTTATTGGGGTTCATTTGCTGGCTGCAACGTCAAATACTGG GGGTATATTAAGGACAAAGA
Downstream 100 bases:
>100_bases AACTCGCCACAAAATAAACCAATAAATATAACAATCGCGCAATACTCACCCTAGGGCGTCCCCGCCCTACTTTCTGGCTA TTTTATTGTTCTTTCATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MANIYERNIPERIATFIQFAEKNPDFSTIFIVTSSDDEGLTYWIDSYDENGADHHIAKRDLIQFCEADMGGSHFCFWDDG QGKSLDEMPVVVAGNEGDFPIVARNFDELLSLMSLGEELYLHGDEASCCNFDGSTQEPEFFEFLTFLEKTLNITPLKTAD EGNAIITQARLAFLDEFNLWVNKALKGVDSENQK
Sequences:
>Translated_194_residues MANIYERNIPERIATFIQFAEKNPDFSTIFIVTSSDDEGLTYWIDSYDENGADHHIAKRDLIQFCEADMGGSHFCFWDDG QGKSLDEMPVVVAGNEGDFPIVARNFDELLSLMSLGEELYLHGDEASCCNFDGSTQEPEFFEFLTFLEKTLNITPLKTAD EGNAIITQARLAFLDEFNLWVNKALKGVDSENQK >Mature_193_residues ANIYERNIPERIATFIQFAEKNPDFSTIFIVTSSDDEGLTYWIDSYDENGADHHIAKRDLIQFCEADMGGSHFCFWDDGQ GKSLDEMPVVVAGNEGDFPIVARNFDELLSLMSLGEELYLHGDEASCCNFDGSTQEPEFFEFLTFLEKTLNITPLKTADE GNAIITQARLAFLDEFNLWVNKALKGVDSENQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21916; Mature: 21785
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIYERNIPERIATFIQFAEKNPDFSTIFIVTSSDDEGLTYWIDSYDENGADHHIAKRD CCCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHH LIQFCEADMGGSHFCFWDDGQGKSLDEMPVVVAGNEGDFPIVARNFDELLSLMSLGEELY HHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEECCHHHHHHHHHCCHHEE LHGDEASCCNFDGSTQEPEFFEFLTFLEKTLNITPLKTADEGNAIITQARLAFLDEFNLW EECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH VNKALKGVDSENQK HHHHHHCCCCCCCC >Mature Secondary Structure ANIYERNIPERIATFIQFAEKNPDFSTIFIVTSSDDEGLTYWIDSYDENGADHHIAKRD CCCHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHH LIQFCEADMGGSHFCFWDDGQGKSLDEMPVVVAGNEGDFPIVARNFDELLSLMSLGEELY HHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEECCHHHHHHHHHCCHHEE LHGDEASCCNFDGSTQEPEFFEFLTFLEKTLNITPLKTADEGNAIITQARLAFLDEFNLW EECCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHH VNKALKGVDSENQK HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA