Click here to switch to the map view.

The map label for this gene is yghZ [H]

Identifier: 218930029

GI number: 218930029

Start: 3327728

End: 3328717

Strand: Direct

Name: yghZ [H]

Synonym: YPO2980

Alternate gene names: 218930029

Gene position: 3327728-3328717 (Clockwise)

Preceding gene: 218930028

Following gene: 218930030

Centisome position: 71.51

GC content: 48.89

Gene sequence:

>990_bases
ATGGTTTATCAAGCAAGTTCCTCTCGCTATCAGGAGATGGAGTATCATCGTTGTGGTCACAGTGGGTTAAAGCTCCCGGC
CATTTCTCTCGGTCTTTGGCATAACTTTGGTGACAGCACACGGTATGAAAATAGCCGTAGCCTGATTCACCGAGCGTTTG
ATCATGGCATCACCCACTTTGATTTAGCTAATAATTATGGGCCTCCCCCCGGCTCCGCAGAGCTGAATTTTGGCCGCATC
CTACAGCAAGACCTGCGCCCTTATCGTGATGAACTGATTATCGCCTCCAAAGCCGGCTATACCATGTGGCCCGGCCCTTA
CGGTGACTGGGGGTCGAAGAAATATCTGGTTGCCAGTATCAATCAAAGCCTGCAACGCATGGGGTTGGATTATGTCGATA
TCTTCTATCACCACCGTCCTGATCCCAATACGCCGCTGGAAGAAACCATGGCAGCATTGGACCTACTGGTGCGTCAGGGC
AAAGCGCTGTATATCGGTTTGTCCAATTATCCTGCAGATCAAGCACAGCTTGCCTGTGAAATTTTGCGTGCACTCGGTAC
CCCCTGCCTGATTCATCAGCCAAAATATTCGATGTTTGAACGCGGGATTGAAGCAGGCTTACAAGATACGCTGGATGAAT
ATGGTGTCGGCTCTATTGCCTTTTCTCCGTTGGCTGGCGGTTTATTAACTGATCGCTATCTGGCGGGTATCCCAGAAGAC
TCACGTGCAGCCAGTGACAGTAAATTCCTTAGCCCTGAACAACTCACCCCTGAAAAACTGGTCAAAATACGCCAATTGAA
TGAGTTGGCCCTCGATCGTGGACAAAAATTATCACAGATGTCTTTAGCCTGGGTGTTGCGTGGCGGGAGAGTCACATCGG
CACTGATTGGTGCCAGCAAAGTCAGCCAGATTGATGATGCTATCGGCATGTTAGCCAATACAAACTTCAGTGATAAAGAA
ATCAACGCTATCGAACATATTTTAGCCTAG

Upstream 100 bases:

>100_bases
CAACTTACACAACCGATGAAAACGCATACACTACAATAGCGCTTATTTTTATTATTGCTGCTATCGCTAATGCCGTTCGC
TATCACTAATAGAGGCCATC

Downstream 100 bases:

>100_bases
ACACTTTCCTATCAAGCTTATCGCTAGGGCACTTCAGGTGCCCTCTGACTGCTGGCTATCGCCCATACAGATAAATCTTA
AAACTTTATTTTACAGCTTT

Product: putative ion channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MVYQASSSRYQEMEYHRCGHSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHFDLANNYGPPPGSAELNFGRI
LQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASINQSLQRMGLDYVDIFYHHRPDPNTPLEETMAALDLLVRQG
KALYIGLSNYPADQAQLACEILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED
SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASKVSQIDDAIGMLANTNFSDKE
INAIEHILA

Sequences:

>Translated_329_residues
MVYQASSSRYQEMEYHRCGHSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHFDLANNYGPPPGSAELNFGRI
LQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASINQSLQRMGLDYVDIFYHHRPDPNTPLEETMAALDLLVRQG
KALYIGLSNYPADQAQLACEILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED
SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASKVSQIDDAIGMLANTNFSDKE
INAIEHILA
>Mature_329_residues
MVYQASSSRYQEMEYHRCGHSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHFDLANNYGPPPGSAELNFGRI
LQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASINQSLQRMGLDYVDIFYHHRPDPNTPLEETMAALDLLVRQG
KALYIGLSNYPADQAQLACEILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED
SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASKVSQIDDAIGMLANTNFSDKE
INAIEHILA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4504825, Length=342, Percent_Identity=33.9181286549708, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=34.4615384615385, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI27436964, Length=334, Percent_Identity=31.437125748503, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=32, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI27436966, Length=325, Percent_Identity=31.6923076923077, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI27436971, Length=314, Percent_Identity=31.5286624203822, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI41152114, Length=115, Percent_Identity=39.1304347826087, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI223718702, Length=117, Percent_Identity=37.6068376068376, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI41327764, Length=118, Percent_Identity=37.2881355932203, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI1789375, Length=333, Percent_Identity=55.8558558558559, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=32.6923076923077, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1789199, Length=346, Percent_Identity=28.9017341040462, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788070, Length=323, Percent_Identity=27.8637770897833, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI48994888, Length=298, Percent_Identity=26.510067114094, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788081, Length=203, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=26.1127596439169, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6323998, Length=319, Percent_Identity=26.0188087774295, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6319958, Length=300, Percent_Identity=25.3333333333333, Blast_Score=86, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6322615, Length=253, Percent_Identity=26.4822134387352, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319951, Length=291, Percent_Identity=24.0549828178694, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640980, Length=326, Percent_Identity=26.0736196319018, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI45549126, Length=327, Percent_Identity=26.2996941896024, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24646155, Length=330, Percent_Identity=28.1818181818182, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24646159, Length=298, Percent_Identity=26.1744966442953, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 36532; Mature: 36532

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYQASSSRYQEMEYHRCGHSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHF
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEE
DLANNYGPPPGSAELNFGRILQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASI
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEEHHHH
NQSLQRMGLDYVDIFYHHRPDPNTPLEETMAALDLLVRQGKALYIGLSNYPADQAQLACE
HHHHHHHCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
ILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED
HHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHCCCCC
SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
VSQIDDAIGMLANTNFSDKEINAIEHILA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MVYQASSSRYQEMEYHRCGHSGLKLPAISLGLWHNFGDSTRYENSRSLIHRAFDHGITHF
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEE
DLANNYGPPPGSAELNFGRILQQDLRPYRDELIIASKAGYTMWPGPYGDWGSKKYLVASI
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCEEHHHH
NQSLQRMGLDYVDIFYHHRPDPNTPLEETMAALDLLVRQGKALYIGLSNYPADQAQLACE
HHHHHHHCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
ILRALGTPCLIHQPKYSMFERGIEAGLQDTLDEYGVGSIAFSPLAGGLLTDRYLAGIPED
HHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHCCCCC
SRAASDSKFLSPEQLTPEKLVKIRQLNELALDRGQKLSQMSLAWVLRGGRVTSALIGASK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
VSQIDDAIGMLANTNFSDKEINAIEHILA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]