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The map label for this gene is sfuB [H]

Identifier: 218930009

GI number: 218930009

Start: 3306758

End: 3308344

Strand: Direct

Name: sfuB [H]

Synonym: YPO2959

Alternate gene names: 218930009

Gene position: 3306758-3308344 (Clockwise)

Preceding gene: 218930008

Following gene: 218930010

Centisome position: 71.06

GC content: 52.61

Gene sequence:

>1587_bases
ATGTCCAATATAAGTACCGATGTTGCACAGGCTGCACTGAGTAAGACAACAGCACGACAATATAGTCACCGTCCGGGTAC
AGGGGTTGTTGTTGTTGCGATCATACTGTCGCTGTTATCCCTGCTACCACTGGGCTTTGTTATCGGTATTGCAATTGATA
CAGGTTGGTCAACGGTTAAGGCACTCGTTTTTCGCCCTCGCGTGGGCGAATTACTGATCAATACCGTTTTACTGGTGGTT
TTCACCTTACCCCTTTGCGCCACGATTGGCGTTGCATTAGCCTGGCTGACAGAACGCACTGCCCTGCCCGGCAGGCGACT
TTGGTCACTTCTGGCAATAGCACCACTGGCAGTACCTGCTTTTGTACAAAGTTATGCCTGGATCAGTCTGATCCCCTCAA
TGAATGGGCTGGCCGCCGGCGTTTTTATCTCGGTGATAGCGTATTTTCCGTTCATCTATTTGCCTGTAGCGGCGGTATTA
CGCCGTCTTGACCCTGGGCTTGAAGATGCCGCCGCATCATTGGGCAATAAACCCATCACGGTATTTTTCCGCGTGACATT
GCCACAGTTAAAATTAGCGTTATGGGGGGGATCATTACTTATCGCCCTGCATTTGCTGGCTGAATATGGCCTGTATGCCA
TGATCCGTTTTGATACCTTTACGACCGCGATTTTTGACCAGTTCCAATCCACATTTAATGGCCCCGCCGCTAACATGCTG
GCGGGAGTACTCGCCTTATGTTGTTTGGGGTTACTGTTGGTCGAAGCCACCAGCCGGGGCTACCATCGTTACGCGCGGGT
CGGTTCCGGTACGCCACGGCGTCAAACCGTCTATTCGATGGGGACCTCACTCACCCTCCTGTGTCTGCTATTGCCCTTAT
TGATCACCACCCTCTCCTTGGGCGTTCCGTTCATTACCCTTATGCGCTGGCTCTCTATTGGTGGCATTGATATCTGGTTG
AACCCGGAACTGCTGCCCGCGTTAAAACAAACGCTGGGATTAGCCCTGAGCGGGGCGGTGATCATTACGCTGTGTGCTAT
ACCAATGGCCTGGCTATCGGTGCGCTATCCGGGGCGGTTACACCGCGCGATGGAAGGGTGTTATTACGTCACCAGTTCGC
TACCCGGGATCGTCGTGGCACTGGCATTAGTGACCATCACTATCCGTATTGCACGCCCTTTGTATCAAACTGAATTTACC
GTGCTACTGGCGTATTTATTGATGTTTACGCCACGTGCATTAATCAGTTTACGGGCTGGTATTGCACAAGCGCCGGTCGA
GTTAGAGAACGTCGCCCGTAGCCTTGGGCGAACACCGACCCAAGCTATGTTAAGTACCACCCTGCGGTTGGCTGCTCCCG
GCGCCGCTGCGGGTGCCGCATTAGTCTTTCTGGCTATCTCCAACGAATTGACCGCAACGCTATTACTGGCCCCGAACGGC
ACCCGAACACTGGCAACTGGGTTTTGGGCATTGACCAGTGAAATTGATTATGTCGCCGCTGCACCTTATGCTTTTCTGAT
GGTGGCACTTTCCCTGCCGTTAACCTGGCTTCTCTACTCTCAATCTCAACGGACAGCAGGACTATGA

Upstream 100 bases:

>100_bases
AGCAAAAAAGTGGTTGAGTTGATGACCGAAGCGGGTCTGCTGTAATCCGTTTTACTCCGCCCCCTGCGGGCGTTTAACAA
ACCGAGTGTCTTTACCGATT

Downstream 100 bases:

>100_bases
GCACGCTTGAACTTCATCATATCGGTAAGTCTTATCAATCTGTCATGGTACTGGACCGAATTGATTTACATGTCCCGCCA
GGTAGCCGCACCGCCATTGT

Product: iron(III)-transport system permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein sfuB [H]

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVKALVFRPRVGELLINTVLLVV
FTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVL
RRLDPGLEDAAASLGNKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANML
AGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSLGVPFITLMRWLSIGGIDIWL
NPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFT
VLLAYLLMFTPRALISLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLLLAPNG
TRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL

Sequences:

>Translated_528_residues
MSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVKALVFRPRVGELLINTVLLVV
FTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVL
RRLDPGLEDAAASLGNKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANML
AGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSLGVPFITLMRWLSIGGIDIWL
NPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFT
VLLAYLLMFTPRALISLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLLLAPNG
TRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL
>Mature_527_residues
SNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVKALVFRPRVGELLINTVLLVVF
TLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPAFVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVLR
RLDPGLEDAAASLGNKPITVFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANMLA
GVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSLGVPFITLMRWLSIGGIDIWLN
PELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRLHRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFTV
LLAYLLMFTPRALISLRAGIAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLLLAPNGT
RTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 56599; Mature: 56468

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVK
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALVFRPRVGELLINTVLLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVLRRLDPGLEDAAASLGNKPIT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEE
VFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANML
EEEEEEHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHH
AGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSL
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH
GVPFITLMRWLSIGGIDIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRL
CCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFTVLLAYLLMFTPRALISLRAG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLLLAPNG
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEEECCCC
TRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNISTDVAQAALSKTTARQYSHRPGTGVVVVAIILSLLSLLPLGFVIGIAIDTGWSTVK
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALVFRPRVGELLINTVLLVVFTLPLCATIGVALAWLTERTALPGRRLWSLLAIAPLAVPA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FVQSYAWISLIPSMNGLAAGVFISVIAYFPFIYLPVAAVLRRLDPGLEDAAASLGNKPIT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEE
VFFRVTLPQLKLALWGGSLLIALHLLAEYGLYAMIRFDTFTTAIFDQFQSTFNGPAANML
EEEEEEHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHH
AGVLALCCLGLLLVEATSRGYHRYARVGSGTPRRQTVYSMGTSLTLLCLLLPLLITTLSL
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH
GVPFITLMRWLSIGGIDIWLNPELLPALKQTLGLALSGAVIITLCAIPMAWLSVRYPGRL
CCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HRAMEGCYYVTSSLPGIVVALALVTITIRIARPLYQTEFTVLLAYLLMFTPRALISLRAG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
IAQAPVELENVARSLGRTPTQAMLSTTLRLAAPGAAAGAALVFLAISNELTATLLLAPNG
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEEECCCC
TRTLATGFWALTSEIDYVAAAPYAFLMVALSLPLTWLLYSQSQRTAGL
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2404942 [H]