Click here to switch to the map view.

The map label for this gene is 218930001

Identifier: 218930001

GI number: 218930001

Start: 3296795

End: 3297826

Strand: Direct

Name: 218930001

Synonym: YPO2950

Alternate gene names: NA

Gene position: 3296795-3297826 (Clockwise)

Preceding gene: 218930000

Following gene: 218930002

Centisome position: 70.84

GC content: 45.35

Gene sequence:

>1032_bases
ATGACAAGGAAGCTTTTTATATTGGTATTCGGTGCGGCCATAAGTGGACAAGTAAACGCCAGTTGTACACTCCACTTGGT
GAGCAATTCAGAAAGCGTCGCTGGCGTGATGCCACTAACATTCCCGATTAGCTCTTTTACTTTCACTATCGATGCCGATG
CACCGAATGACTCTACAGTGCCTATCCTAGAAAAAGTGGCACAACCACAAGGTTTGGCAGTAATTTATTACTGCACCTCG
GTCGATCGTTACGGCAAGAATGTGGGGCCGGTATTAGGCCAGGATTTAGGTAATGGGCTTTTTGCAACGAATATCGATGG
CATTGCCATCAAACCTGCATGGAATAACGGCGCAGCCTATGGTTATTTCAACTCATCGGGCATCATGCCTGCCTTTGAGC
GTGAGGGCGTTCCGACCGAAGAAGGTTTTTGGACGTATCCTGCAACTTCACACTTCAGATTCGAACTCTATAAAATTAAA
GATACGTTGAATTTAACTGATACCAACGGCGAACGTGTTCTGCCGGGTGGCACAATAGCTTATACCTGGGCGACGAATAA
TAGTTTGGCAAACTACGCACAAAGACTGGAAATCGGTGAAATAAAAGTCATCAGCACCCCGAGTTGTACCTTTGATGGCC
CCCAAAAGGTTGACTTTGGTATTGTCACGTCAAGCAACTTGAATAATGGGGGTATCGAACGCGATCTCGATTTTAATATT
ACCTGTAAAACGGATTATGGCCACTACTCAGCAACGGCGGCCATTTTCACGCAAACATCATCTGCCGATAATAATTACAT
CAAGGTAAAAGACAGCCAGAACCAAGAAGACCGGTTGCTTATCAAAATCAGCGACACCAACGGTCAACAGATGAAAGTGA
ATGGCAGCACGACAGAACAACAAGTCAATATTGCCAGCGGTGTACCTGCAGAGTTCAAGTGGAAAGCAAAACTGGAAGCC
GCTCCGGCAGCGAATAAACCGGCTATTGGTAATTTTTCCGCGATGGCAGAAATTATTCTGCAGATAAAATAA

Upstream 100 bases:

>100_bases
TTTTTCAGAAAAAACTATCGGCAAAAGCTTCGGCGAATTGCTGCAGTTCATTCCTCAGGAACTGATTTCGAAACTCAATG
AAGGACAGGAGTAATTTGCC

Downstream 100 bases:

>100_bases
CCCCATTCGGCAGCACGTTAAATTTTACACGGATTATATATGCAGTCTGTACCCTCTATTTTTGTGAGTATTGCAAGTTA
CCGGGATCCTGAGTTGATCC

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MTRKLFILVFGAAISGQVNASCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYYCTS
VDRYGKNVGPVLGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPATSHFRFELYKIK
DTLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVDFGIVTSSNLNNGGIERDLDFNI
TCKTDYGHYSATAAIFTQTSSADNNYIKVKDSQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAEFKWKAKLEA
APAANKPAIGNFSAMAEIILQIK

Sequences:

>Translated_343_residues
MTRKLFILVFGAAISGQVNASCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYYCTS
VDRYGKNVGPVLGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPATSHFRFELYKIK
DTLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVDFGIVTSSNLNNGGIERDLDFNI
TCKTDYGHYSATAAIFTQTSSADNNYIKVKDSQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAEFKWKAKLEA
APAANKPAIGNFSAMAEIILQIK
>Mature_342_residues
TRKLFILVFGAAISGQVNASCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYYCTSV
DRYGKNVGPVLGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPATSHFRFELYKIKD
TLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVDFGIVTSSNLNNGGIERDLDFNIT
CKTDYGHYSATAAIFTQTSSADNNYIKVKDSQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAEFKWKAKLEAA
PAANKPAIGNFSAMAEIILQIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37075; Mature: 36944

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKLFILVFGAAISGQVNASCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTV
CCCEEEEEEEECEECCCCCCEEEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCCCC
PILEKVAQPQGLAVIYYCTSVDRYGKNVGPVLGQDLGNGLFATNIDGIAIKPAWNNGAAY
HHHHHHCCCCCCEEEEEEECHHHCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCEEE
GYFNSSGIMPAFEREGVPTEEGFWTYPATSHFRFELYKIKDTLNLTDTNGERVLPGGTIA
EEECCCCCCCCHHHCCCCCCCCEEECCCCCCEEEEEEEEEEEEEEECCCCCEECCCCEEE
YTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVDFGIVTSSNLNNGGIERDLDFNI
EEEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEE
TCKTDYGHYSATAAIFTQTSSADNNYIKVKDSQNQEDRLLIKISDTNGQQMKVNGSTTEQ
EEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCE
QVNIASGVPAEFKWKAKLEAAPAANKPAIGNFSAMAEIILQIK
EEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHHEEEEEECC
>Mature Secondary Structure 
TRKLFILVFGAAISGQVNASCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTV
CCEEEEEEEECEECCCCCCEEEEEEEECCCCEEEEEEEEEECCEEEEEEECCCCCCCCC
PILEKVAQPQGLAVIYYCTSVDRYGKNVGPVLGQDLGNGLFATNIDGIAIKPAWNNGAAY
HHHHHHCCCCCCEEEEEEECHHHCCCCCCCHHHHHHCCCEEEECCCCEEEEECCCCCEEE
GYFNSSGIMPAFEREGVPTEEGFWTYPATSHFRFELYKIKDTLNLTDTNGERVLPGGTIA
EEECCCCCCCCHHHCCCCCCCCEEECCCCCCEEEEEEEEEEEEEEECCCCCEECCCCEEE
YTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVDFGIVTSSNLNNGGIERDLDFNI
EEEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEE
TCKTDYGHYSATAAIFTQTSSADNNYIKVKDSQNQEDRLLIKISDTNGQQMKVNGSTTEQ
EEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCE
QVNIASGVPAEFKWKAKLEAAPAANKPAIGNFSAMAEIILQIK
EEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA