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The map label for this gene is 218929999

Identifier: 218929999

GI number: 218929999

Start: 3294483

End: 3295508

Strand: Direct

Name: 218929999

Synonym: YPO2948

Alternate gene names: NA

Gene position: 3294483-3295508 (Clockwise)

Preceding gene: 218929998

Following gene: 218930000

Centisome position: 70.79

GC content: 53.8

Gene sequence:

>1026_bases
ATGTTACCCGATGAATCCGTTCACCAGGAAAAACATGCCAATCTGGACGCCTGGTATCAGGAGTCTCAGCCATGGAACGC
CGGTTTTATCAGCATGATGCGGGCGAATGCCGCCCGCAACCCTACCCTGCCAGCGCCAGGAAAAGCGCCCTTGCCTGAAC
AGGAAGCCTTCCGCATCGGGCAAAGTGCGCACATGACGTTCTCTCCGCGTGAGATATCTCACGCGGTCATGAGAGACGGG
AAAATGGATCTGCAACTTTTTGGCTTAGGGATTTGGGGGCCAAATGGTGCGATGCCGCTTCAGATGACCGAACTGGCCTA
TACCCGTGCCGAGTTGCATGATCATACGATGACGGATTTCGTCGACCTTTTTCATCACCGCGCATTATCACAGCTTTATC
GGGCGTGGTTTGTCTCTCAGGATACCGCCTCGCTAGATCGGCAGAGTGATGAAAAATTCTCCTTCTATGTCGGTAGTCTC
GCCGGGCTGGATCCTCAAGAACTTAATGATACCGAACTCCCGGTTCATGCCCGGTTAGCCTCCTCTGCCCATTTGATTCG
TGAAGCGCGCAACCCCGAAGGGCTCGTGGGCGCATTGCAGTACTACTTTGACGTCCCCGTGCGGATGGTGGAGTACGCCG
AGCAGTGGATCTTTCTGGAAGAAAGCGACCAGACACAATTGGGTGATGGTGCAGGCGCGATGCTCTTGGGCGACGGTGCT
ATTTTGGGCAATACCGTTTTGGATCGGCAGCATAAATTTCAACTGATCCTCGGCCCCCTCAGCCTGCAACAGTACCTGCG
CTTTAGCCTCTGGGGACAAGACTTACCGGTATTGCGAGAGTGGGTACGTAACTTTGTTGGGTTCGAATACGCCTGGGAAG
TCCAGTTGTTGTTAAGCGCCGATGAGGTTCCCATGGCAACACTCGATGGCGGACATCAATTGGGATACACCTCTTGGTTA
GCCCGCAGTGATACCACCCTTGATGTCGGTGGGATGAGTTTTGAGCCTGAAATGCATCACGATTAA

Upstream 100 bases:

>100_bases
ATGCCGCAATAAATGTGTTTACCGAGACCGAGCTAAACTCCATGCAAAGAGGACGTGTCGGTCATTGGAAAGCCCGCCCT
GGCAGACGAGGAGTCCTGTA

Downstream 100 bases:

>100_bases
TTAATGCATCGCTCTTAATCAATAATCTTCATGGCCAATATGCTGGCAGCAGAAAAAATAGACAACGACGTCCACCCATG
GCGTTAAAAGGAACAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; T6ss R; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpG; Type VI Secretion System Protein ImpH; Conserved Protein; Type VI Secretion System Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMRDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD

Sequences:

>Translated_341_residues
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMRDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD
>Mature_341_residues
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMRDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38488; Mature: 38488

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIG
CCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
QSAHMTFSPREISHAVMRDGKMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDF
CCCCEEECHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
VDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSLAGLDPQELNDTELPVHARLA
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEHHHCCCCHHHCCCCCCCHHHHHH
SSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCC
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSA
EECCHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEEC
DEVPMATLDGGHQLGYTSWLARSDTTLDVGGMSFEPEMHHD
CCCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIG
CCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
QSAHMTFSPREISHAVMRDGKMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDF
CCCCEEECHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
VDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSLAGLDPQELNDTELPVHARLA
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEHHHCCCCHHHCCCCCCCHHHHHH
SSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCC
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSA
EECCHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEEC
DEVPMATLDGGHQLGYTSWLARSDTTLDVGGMSFEPEMHHD
CCCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA