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The map label for this gene is fdx [H]

Identifier: 218929982

GI number: 218929982

Start: 3272776

End: 3273036

Strand: Direct

Name: fdx [H]

Synonym: YPO2927

Alternate gene names: 218929982

Gene position: 3272776-3273036 (Clockwise)

Preceding gene: 218929981

Following gene: 218929994

Centisome position: 70.33

GC content: 45.21

Gene sequence:

>261_bases
ATGGCTTTATTGATTACTAAACGTTGTATTAATTGCGATATGTGCGAACCGGAATGCCCGAATGAGGCAATCTCCATGGG
TGCAGAAATCTATCAAATTGATCCGATGCGCTGTACTGAGTGTGTAGGTCATTACGAAACGCCAACCTGTCAACTGGTCT
GCCCTATTGATAATACGATTTCTGCCGACCCAGCTTGGGTTGAGACTAACGAGCAGTTGTGGGATAAGTTTGTTCAGCTA
CACCATGCCGATCGTCTGTAA

Upstream 100 bases:

>100_bases
CATAATACGCGATATAAAAAGTAGGTTATGTAAAGTGGCAAGCGATGAGATATGTCATTAACTGCATGATTTAAAAAGAT
TAAAAAGGTAAGTTACTGAA

Downstream 100 bases:

>100_bases
TACCGCTCGTCATACCTCCTCGCTCATATCAACAAGCCCCAGTATGCAATAAATATCCTCCGGCATAGCCGGAGGTTTTT
CATATGCGCCTATAAGGCTC

Product: putative [4Fe-4S] ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MALLITKRCINCDMCEPECPNEAISMGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQL
HHADRL

Sequences:

>Translated_86_residues
MALLITKRCINCDMCEPECPNEAISMGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQL
HHADRL
>Mature_85_residues
ALLITKRCINCDMCEPECPNEAISMGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTISADPAWVETNEQLWDKFVQLH
HADRL

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=86, Percent_Identity=79.0697674418605, Blast_Score=145, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9814; Mature: 9683

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLITKRCINCDMCEPECPNEAISMGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTI
CEEEECCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCC
SADPAWVETNEQLWDKFVQLHHADRL
CCCCCEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALLITKRCINCDMCEPECPNEAISMGAEIYQIDPMRCTECVGHYETPTCQLVCPIDNTI
EEEECCCCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCC
SADPAWVETNEQLWDKFVQLHHADRL
CCCCCEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]