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The map label for this gene is csiE [H]

Identifier: 218929962

GI number: 218929962

Start: 3245213

End: 3246574

Strand: Direct

Name: csiE [H]

Synonym: YPO2903

Alternate gene names: 218929962

Gene position: 3245213-3246574 (Clockwise)

Preceding gene: 218929959

Following gene: 218929967

Centisome position: 69.73

GC content: 46.92

Gene sequence:

>1362_bases
ATGCGCCTAAACACGCCCTTTAAGCCTCGGTTATCTGATGATCAACCGCTATCTGGTCAACAACGCCGCTGCCATATGTT
GCTGATGTTATTTATGCCAGCACGCAAGGTACAGTTAGACACCATTAGCCAATTTAACGGGGTCGATCTTGCGACTACCC
GGCAAGATATAGCCGAGGTTGCTAGCGAAATCCAGCGTTTCTACCATTTGGAACTTAATGCCAGTGCCGACGATTATTAT
CAGATTAATGGGAGCCGACTCGATAAACGACTCTGTTTGATCCATTGGCTACGTCGTGGGCTGCGTTATTGTCCACATTT
TATTGAACACTATTTTTCCCCCGACTTATATCAAGCACTGGCGTGGAATAATGGCCTGCTGTCGTCGGCTCTGCGACGAT
CAACTCTACGACAATCAACTTTGCGACAATCAACTTTGCGGCAATCAATTCTACGGCAATCAACTTTGCGACAAATCGTT
TACCAGTGTGAGCCCCACCTAAACCGCCAACTCAGTGAAAAAGATCGTCAGTTTTTGCAACTGTATTTGGCGTATTGTGT
CTGGGAAAACCAACAGCACACCGTGCCACAATTATCCATGACCCAACAGCAATGGTTAGAACAAAAACCTGCGCGGGTTG
CCGCTGATCATTTATTCAATGCACTCAACCGGTTATTGATCCCTCCGCTGGGTTTAATTGAGCGCGATATGCTGATCCTG
ATGTTGACAATGATCAAAGCACACCACTACCACAGCACCCAATCACCGGAAGATGCCCGCCTGATAGCGGCTATCAAGCA
ATTAATTCACCGTTTTAAGCGACTGTCCGGCATGCATTTTAGTTGTGATGACTCGCTGGTCAGCCAGCTATTCGCGCATC
TCGCCCCCGCCATTGAGCGTTGCTATTTTAATATTGGGATCGACCATTCACTCCCCAAAGATATCAGTAAGATGTATCCC
CGTTTGCTCCGTACCACACAGCAGGCGCTGATCAAGTTTGAGCAGGAGTACCAGATTCGCTTTTCTATTGAAGAAGTGAT
TTTGATCGCCATCAGCTTCGGTGCCTGGTTAATACAGGGGAATGCATTACAGGAGAAGCAGATTTTATTATTGACGCACG
ATAACCCAATATTGGAAGCCCAAGTCGAGCAGCAAATTCGTGAACTGACCTTACTACCGCTACATATTAAATATTTATCT
CATGATGTTTATCTGCAATCAGGGGCCCCCGCGGGCACTGCGGTGGTACTTACCCCCTATGTTTTGCAATCAACTGAATC
AGCGCCGCCGCTGATTCAGATATCATTTCCGTTAACTGAGCCGCAAAGTATTCAGTTATGCCGCATATTGGAACTGCCTT
AG

Upstream 100 bases:

>100_bases
TGTAAGTCGATGTAAAAAACTACTGGCCCGGTAAACCGAATGAATCTCTTTTGCTATGCTTAAATCCGATAAATAACGAT
GATTCATCAAAGATATTTAT

Downstream 100 bases:

>100_bases
CTGGCTAATTCATTTGGGTTCGCGGCCACTCGTGGCCGGATAAACAGCGCCGGAATAACAATGAGCGCCATAACCCAAAA
GACCCCACTCTGATAATTCT

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSILRQSTLRQIV
YQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLIL
MLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHSLPKDISKMYP
RLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLS
HDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP

Sequences:

>Translated_453_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSILRQSTLRQIV
YQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLIL
MLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHSLPKDISKMYP
RLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLS
HDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP
>Mature_453_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSILRQSTLRQIV
YQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLIL
MLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHSLPKDISKMYP
RLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLS
HDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=443, Percent_Identity=37.4717832957111, Blast_Score=286, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 52588; Mature: 52588

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHH
ASEIQRFYHLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQAL
HHHHHHHEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AWNNGLLSSALRRSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLIL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIER
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
CYFNIGIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHEEEC
NALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPY
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECHH
VLQSTESAPPLIQISFPLTEPQSIQLCRILELP
HHHCCCCCCCEEEEECCCCCCCCCCHHHEECCC
>Mature Secondary Structure
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHH
ASEIQRFYHLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQAL
HHHHHHHEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AWNNGLLSSALRRSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQLSEKDRQFLQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPLGLIERDMLIL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIER
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
CYFNIGIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHEEEC
NALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAPAGTAVVLTPY
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECHH
VLQSTESAPPLIQISFPLTEPQSIQLCRILELP
HHHCCCCCCCEEEEECCCCCCCCCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]