| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929944
Identifier: 218929944
GI number: 218929944
Start: 3220231
End: 3222651
Strand: Reverse
Name: 218929944
Synonym: YPO2884
Alternate gene names: NA
Gene position: 3222651-3220231 (Counterclockwise)
Preceding gene: 218929947
Following gene: 218929943
Centisome position: 69.25
GC content: 38.99
Gene sequence:
>2421_bases ATGAGATATAATCGTAACCATATGCTAACGTTAATGTTCTCTTTATTAATTTTTGATGCCTATGCAAATGAACCCAAAGT CTGTTTTTATATGGATGATGACTATAATGGTGAGTCTCTCTGCGCGGCTCAAGGGAACTCAGTTGCCAGTATTCCGGATA AATGGAATGATCGCATATCCTCAATTTCCATTCCCCACGGTTTAGTTGTCACCGTCTATGAAGATGTCGATTTTTTGGGC GCTTCTCGGTCTTTTGAAGCCGATGTGGATTTGGTTTCAGATAAGGATTTGATATATTTAAATGATAATATAAGTGCATT TAAAATAAAAAAGGCAGTTTGTTTTTATGGCGAAAGTAACTTTACAGGTGACTCGTTGTGCTTATCTAGTGGTGAGCAAT TTGACTTGTATCGTGGTAACTATCCTGAAAGGAAGCAATCTCATTTGGTAAATCCCTTAAATGATGAGGTATATTCAATA AAAATCCCTCCAGGAATGCAAACTACAGTCTATGAGGACGATGATTATAATGGTAAATACTTTGTTTTGACAGAGGATTA CACACCTGATGATTTGTTGATAATAAGAATGAACAATAAAATCAGTAGCATGCGAGTTTCTCAAGATGAAGATTTCATTT GTGATCGTTTCTGTTCTATAAAAAAATCAATTAAATTTAAAATACAAAAAAGTTTTGGTTCCTATTGGATTGACCCACGA ATAAAATACAGAGATATATTGCTCGATTTTCAGTTATCTGACACTGATGATTATTCAATAAAATTTTTTGATGAGGGTCT TATAAAAGTTAAAAATTATAAATTATTTTTCTTTGATGGTAATGAAAAACATGGTGAGGGTTTTTTGTTTAATTTAAGTG ACAAAAGTAGTAATTTGTCATTTTTATTGCGTTTTAACGGTGGTTTTTTTCAAATTCAATTTGTTGAATCATTAAATAAT GAAATTGTTTATTCTTCTCCTTTGATTGGAACGTTATTTGATGATGCTAACTCAGATGTTATTTTTGATATCAATAATGT AGATGCAAATAGCCCAATCGTTATTGATAAAATGGTATTAACCGTTGGTAAGGAGCATAACCGGGCTGAACGTAGTACTC TGGGGCTAGCGACTTGTTGGGCAATACCCATACTGAGTATTTATAACTATATTGTTCAGGGGCATTGCAATCAGGCAGAT AAGTTTGTCCATAATGCTGCCGATTTTTTTGGTAGCCCGGCAGATAAGATATTACAAATATTTGGTTCCTCTTTACCCTT ACCCCCAAAAAATAGCAATGAAACATTAGATGACGAATCTGCATTAATTAATTTTATGTCTGATGTTAAAGGGACGTTAA CCTATATTACGACCAATATGGGCGAACACGCATTAACCGTACCGGCAACGGCACTCGCGTGCAAAGCCTCAATGCGAGAG AAAATCCTGCCTCATCTGCGTAACCGACGTGATCTTGCTCCAGGGTGTATCGATTGGACTTTGAGTATTTTAACCGATTT TACCTTGTTGTTTGGTGCCAGCATTGAGTATTGGAATAGCAAAAATTTTGGGCGAGTAATAGAAAATATTGTTCGCGAAG GGGAGATCGGTTCTGCTGTGGCAGATGTGGACACAGCATCACGTTTAATCGAGTCAGTTCAGGCCCATGTGGCTGAAGCG ACAGAGGTTGCAGATATCATTCATCTCAAAACGGCATTCGACTTTTCTCAACTCAGTTATGTCAGTTATGTACGTCATAC CGAAGAAGAAGTGGTATCGCCACAAAGCGCGCAGGCGCTACCCTTAGGGCGTTATGAACTGGCACTGGTAGATTACCATT TTATCGAGACGGTACCCAGAATTCGTCAGGATGGCCGTTGGGTAGAACGTCCAGATCTGCATTTTGATATTGAAGTGATT AGCGGGGTTCCCGAAGAAACTGATGCGAGCCGGCAAGTGCTTTTGCCGATTATCGAAGCGTGGCAGCATAGCTATAGCCA ACAAGAATTACTTTTTCACGCCTCGGATATTCTTCCAGAAAGTAGCCTGGCTCGATATGAAATTGAGCCGTTGTTAGAGG CTTCACGGCTGACCAGCGAAGTTGCAATCAGTTGGTTAAGGACTAGCCGTGATGATTTTGTTTACGTCGTAGTCCGTTTG GAGGGCGAGGTTATTAGCCTCACCATGGCAGTCGATATCAATATTAATGATGTGGGGGTTGCCGGGTCATTAACCAATCC AGATTATGTAATAACACCTAATGCAGAAGGGGCCGTCAGAGGCGCGGGTACGGCGGCGATCCGAGCATTAGCTGACCACT TTAAACGTAAAGGGAAAATATCCTTGGTCTCTTCTGTTATTAGTCAGCCATCCGCTATTGTGAAGAAAAAAGTGGGTTTT AGATTTATTGAAGAACTTTAA
Upstream 100 bases:
>100_bases AAATTATTTATTCTAATATAAAGTTTTTAGGTCAGGAAATAACAATCTCTTATTTTTAAAATAATGGATTATTAATAATA GTTTAAAAGGTATATATATT
Downstream 100 bases:
>100_bases GGATATTGGGTACTCACTGATTGGAAAAAAAGATAAATTAAACATTATTATGTGCATTTTCTCAGTGACATTAGGCGCGG TTAGGTTTTTACAAAAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRISSISIPHGLVVTVYEDVDFLG ASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESNFTGDSLCLSSGEQFDLYRGNYPERKQSHLVNPLNDEVYSI KIPPGMQTTVYEDDDYNGKYFVLTEDYTPDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWIDPR IKYRDILLDFQLSDTDDYSIKFFDEGLIKVKNYKLFFFDGNEKHGEGFLFNLSDKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDANSDVIFDINNVDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWAIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPPKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRNRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVDTASRLIESVQAHVAEA TEVADIIHLKTAFDFSQLSYVSYVRHTEEEVVSPQSAQALPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETDASRQVLLPIIEAWQHSYSQQELLFHASDILPESSLARYEIEPLLEASRLTSEVAISWLRTSRDDFVYVVVRL EGEVISLTMAVDININDVGVAGSLTNPDYVITPNAEGAVRGAGTAAIRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL
Sequences:
>Translated_806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRISSISIPHGLVVTVYEDVDFLG ASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESNFTGDSLCLSSGEQFDLYRGNYPERKQSHLVNPLNDEVYSI KIPPGMQTTVYEDDDYNGKYFVLTEDYTPDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWIDPR IKYRDILLDFQLSDTDDYSIKFFDEGLIKVKNYKLFFFDGNEKHGEGFLFNLSDKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDANSDVIFDINNVDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWAIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPPKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRNRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVDTASRLIESVQAHVAEA TEVADIIHLKTAFDFSQLSYVSYVRHTEEEVVSPQSAQALPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETDASRQVLLPIIEAWQHSYSQQELLFHASDILPESSLARYEIEPLLEASRLTSEVAISWLRTSRDDFVYVVVRL EGEVISLTMAVDININDVGVAGSLTNPDYVITPNAEGAVRGAGTAAIRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL >Mature_806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRISSISIPHGLVVTVYEDVDFLG ASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESNFTGDSLCLSSGEQFDLYRGNYPERKQSHLVNPLNDEVYSI KIPPGMQTTVYEDDDYNGKYFVLTEDYTPDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWIDPR IKYRDILLDFQLSDTDDYSIKFFDEGLIKVKNYKLFFFDGNEKHGEGFLFNLSDKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDANSDVIFDINNVDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWAIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPPKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRNRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVDTASRLIESVQAHVAEA TEVADIIHLKTAFDFSQLSYVSYVRHTEEEVVSPQSAQALPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETDASRQVLLPIIEAWQHSYSQQELLFHASDILPESSLARYEIEPLLEASRLTSEVAISWLRTSRDDFVYVVVRL EGEVISLTMAVDININDVGVAGSLTNPDYVITPNAEGAVRGAGTAAIRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90764; Mature: 90764
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRIS CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCEECCCCHHCCCHH SISIPHGLVVTVYEDVDFLGASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESN EECCCCCEEEEEEECCHHCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEEEEEECCCC FTGDSLCLSSGEQFDLYRGNYPERKQSHLVNPLNDEVYSIKIPPGMQTTVYEDDDYNGKY CCCCHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCEE FVLTEDYTPDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWIDPR EEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCC IKYRDILLDFQLSDTDDYSIKFFDEGLIKVKNYKLFFFDGNEKHGEGFLFNLSDKSSNLS EEEEEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCEE FLLRFNGGFFQIQFVESLNNEIVYSSPLIGTLFDDANSDVIFDINNVDANSPIVIDKMVL EEEEECCCEEEEEEHHHCCCCEEECCCCEEEEECCCCCCEEEEECCCCCCCCEEEEHHHH TVGKEHNRAERSTLGLATCWAIPILSIYNYIVQGHCNQADKFVHNAADFFGSPADKILQI HHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FGSSLPLPPKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHH KILPHLRNRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCHH ADVDTASRLIESVQAHVAEATEVADIIHLKTAFDFSQLSYVSYVRHTEEEVVSPQSAQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCC PLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVISGVPEETDASRQVLLPIIEA CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEHEECCCCCCCCCCHHHHHHHHHH WQHSYSQQELLFHASDILPESSLARYEIEPLLEASRLTSEVAISWLRTSRDDFVYVVVRL HHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE EGEVISLTMAVDININDVGVAGSLTNPDYVITPNAEGAVRGAGTAAIRALADHFKRKGKI CCCEEEEEEEEEEEECCCCEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCH SLVSSVISQPSAIVKKKVGFRFIEEL HHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRIS CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCEECCCCHHCCCHH SISIPHGLVVTVYEDVDFLGASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESN EECCCCCEEEEEEECCHHCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEEEEEECCCC FTGDSLCLSSGEQFDLYRGNYPERKQSHLVNPLNDEVYSIKIPPGMQTTVYEDDDYNGKY CCCCHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCEE FVLTEDYTPDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWIDPR EEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCC IKYRDILLDFQLSDTDDYSIKFFDEGLIKVKNYKLFFFDGNEKHGEGFLFNLSDKSSNLS EEEEEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCEE FLLRFNGGFFQIQFVESLNNEIVYSSPLIGTLFDDANSDVIFDINNVDANSPIVIDKMVL EEEEECCCEEEEEEHHHCCCCEEECCCCEEEEECCCCCCEEEEECCCCCCCCEEEEHHHH TVGKEHNRAERSTLGLATCWAIPILSIYNYIVQGHCNQADKFVHNAADFFGSPADKILQI HHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FGSSLPLPPKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHH KILPHLRNRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCHH ADVDTASRLIESVQAHVAEATEVADIIHLKTAFDFSQLSYVSYVRHTEEEVVSPQSAQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCC PLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVISGVPEETDASRQVLLPIIEA CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEHEECCCCCCCCCCHHHHHHHHHH WQHSYSQQELLFHASDILPESSLARYEIEPLLEASRLTSEVAISWLRTSRDDFVYVVVRL HHHCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE EGEVISLTMAVDININDVGVAGSLTNPDYVITPNAEGAVRGAGTAAIRALADHFKRKGKI CCCEEEEEEEEEEEECCCCEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCH SLVSSVISQPSAIVKKKVGFRFIEEL HHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA