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The map label for this gene is yafU [C]

Identifier: 218929923

GI number: 218929923

Start: 3199551

End: 3200195

Strand: Direct

Name: yafU [C]

Synonym: YPO2863

Alternate gene names: 218929923

Gene position: 3199551-3200195 (Clockwise)

Preceding gene: 218929921

Following gene: 218929924

Centisome position: 68.75

GC content: 41.71

Gene sequence:

>645_bases
GTGGCGCGGGTGTTTTCCGTTACCGATCCTATTTCTGCTTATGCCGGAAATATCTACGACTCACGGGGAGTCTATGATGT
TATCCGAGAATTTAAGCGATTCAGCATCACCGCGACAGAGTATGTGGGCGAGAATGGGCGTAAGTATATTCACATTTCTG
GTTATGCCGGCCTTAGGCGTATTATCACTGGAACCCGTTATGGTGCCAGCCACCCACAAATGCTATCAATGGGAATCGGC
CAGCAAGGTCTCAGTTCCAATATTGTTAAAGGTCTAAAATTCTGTATTCTCTTTTCTATTGGCTATCGAACGATTGAAGG
TATCTTTAAAGATGAATATACCTTAGCGGAATTTATCGGCAATATAACGATGGATATGGCTAAAATAGCCATTGTCGCGG
CGACTTCTTTTATTGTAGGTGTACTCTTCACTGCGACAGTTCTTGCAGGTGGCAGTATTATTGTCGTTGCTGGGGTAGCT
TTTGCCGTTGGCTTTGTAGCTACCGCTATCCTAGATCATTTCGATGAAAAGTATGGTATAAGTGAAAAATTAATCGCATT
ATTAACCAAAGAAATGAGAAAAAAACCAAGAACACAAGAAGCAAACTTTCAGTCTATTCTTAATGGATTAGGGCGACTTA
AATGA

Upstream 100 bases:

>100_bases
TAAGTTTCTTTTCGTCCATAATTTGCCTGTCTCCGTTGTTGGAGTGAAGATATCAAAAACAGGCAATTACACAATATTGT
TTACAGTCTCTACTAATCCT

Downstream 100 bases:

>100_bases
ATAATAGATTATTTAAAACATTAGGTGCAATCATAGCATTATTAATATTTACGCCAATGATATATTTAGTGAGCACTTAC
ATCATTTCATTAATAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIG
QQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVA
FAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Sequences:

>Translated_214_residues
MARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIG
QQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVA
FAVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
>Mature_213_residues
ARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQ
QGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAF
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23373; Mature: 23241

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRR
CCCEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHHHHH
IITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIG
HHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRR
CCEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCHHHHHH
IITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIG
HHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NITMDMAKIAIVAATSFIVGVLFTATVLAGGSIIVVAGVAFAVGFVATAILDHFDEKYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA