Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929876
Identifier: 218929876
GI number: 218929876
Start: 3142684
End: 3142989
Strand: Reverse
Name: 218929876
Synonym: YPO2811
Alternate gene names: NA
Gene position: 3142989-3142684 (Counterclockwise)
Preceding gene: 218929877
Following gene: 218929873
Centisome position: 67.54
GC content: 44.12
Gene sequence:
>306_bases ATGGATCACATTAATAATGCTAAACGCGTTTTAGATGAAAACGCCAAAGTGCTTTACGGCATCTTTGGTGTCATTAGCTG TTCTGGCTATTTTCCACCTTTACCTTTCTTGAATGAATTCTTCATGGCTGGCAGTGACCCATGTGATCAAGATGAAAGAA TGGATAGTTGGTGTCCATTTACACTCACGAGTTCTGAATATGAGGAGGTAAAGGCCTGGTGGCTTGTCTCTCGTCCAGGT ACTGTTGAGTCCGCACTTGGCAGCGAGTGCTGGGATGATTGGATTCAAGAGATCCTGGAGCTATAA
Upstream 100 bases:
>100_bases TTAGGCGAGCCATAAACGACCATGAACTGAAGCGGTGCATGGCACCTGCAACCCATCTTACATCTGGAACTAAAACGGAG ATATTTACAAATGGATTTCT
Downstream 100 bases:
>100_bases ATACCCGGTAGGTATCAATACGGATTGGCGCCAGATTTGGTTTGGCTAACAAATCTTTTCATTTGTGCCACGGGTACCCC GTTGTGCGGCTAAACGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MDHINNAKRVLDENAKVLYGIFGVISCSGYFPPLPFLNEFFMAGSDPCDQDERMDSWCPFTLTSSEYEEVKAWWLVSRPG TVESALGSECWDDWIQEILEL
Sequences:
>Translated_101_residues MDHINNAKRVLDENAKVLYGIFGVISCSGYFPPLPFLNEFFMAGSDPCDQDERMDSWCPFTLTSSEYEEVKAWWLVSRPG TVESALGSECWDDWIQEILEL >Mature_101_residues MDHINNAKRVLDENAKVLYGIFGVISCSGYFPPLPFLNEFFMAGSDPCDQDERMDSWCPFTLTSSEYEEVKAWWLVSRPG TVESALGSECWDDWIQEILEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11589; Mature: 11589
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHINNAKRVLDENAKVLYGIFGVISCSGYFPPLPFLNEFFMAGSDPCDQDERMDSWCPF CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCE TLTSSEYEEVKAWWLVSRPGTVESALGSECWDDWIQEILEL EECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDHINNAKRVLDENAKVLYGIFGVISCSGYFPPLPFLNEFFMAGSDPCDQDERMDSWCPF CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCE TLTSSEYEEVKAWWLVSRPGTVESALGSECWDDWIQEILEL EECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA