Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218929870
Identifier: 218929870
GI number: 218929870
Start: 3135507
End: 3137135
Strand: Reverse
Name: 218929870
Synonym: YPO2804
Alternate gene names: NA
Gene position: 3137135-3135507 (Counterclockwise)
Preceding gene: 218929873
Following gene: 218929866
Centisome position: 67.41
GC content: 52.61
Gene sequence:
>1629_bases ATGAAAACATGGATAGCGCGTCTTTTAGGTAAAGATATTTCAATTGATTTTCCAGCCCCTTGGGCGGCCGATAGCACGGC AATTTATCGTTGGTTGGCGACTTGGCCGGATAGCGATGGGCCTCTGCCCGCAGAGGCAGAAACCTTGCCGGATGAGCCTT CGGCCATTGAGGGTAAAATCCGGTGGTCGGCTGGAGCGCTTGATGGTGTCTTTGGGCACCATGTTGCAGAGGCTGATGAT GAAACTCCGGTTGAGGCCATCATGGCGGCACTGAGAAGTGTGTTGCATAAGCCGCAGCAGCAGGATATCGAGCAACTGTA TCGTTTGTTGTGCCATGCGTCGCCGTTAAATTATCTCGATGTCTTGCTCCCTGCGGTTGCGCAAGATCCGCAACTGCCCG CCAATAAATTGCAGGCGTTGGCAGAATGGCTGGCAACCGAAAGCCCAGATCGCAACGCCGTTAAGGTAGCCATAGCGCTA TTGGGTTTTTTCCCAACGCAGAAAAGTTGTCAGATACTCAGTACATTGGGGGCACATGACGAGTTTACGCTTTATGCGGC AGTGGCACTGAGATCCATACTGCCAGAGGATGAATATGAACGTGCCTGGCTTGCGATGGCGAAGCGTGCTGGTGGCTGGG GAAGAGTGCAGTTGATCGAGCGTTTGCCCGAATTTTTGAGCAAACAGAGTCGCGATTGGTTGTTGCGTGAGGGTTACCGT AACGCGGTGATGTATGAATACACTGCCTGGCATTGTGCGACTCACGGGCAATTACTTCAGGCAATGCAACAACTTAAGAC AATGCAAAAACAGCCCGATGCGCCGCTATTACTGGGGGCTGCAGAGATTTTGCAGGCGTTAATTAACGGCGGCCCAGCGC AAAATATGCATGATTACGCCGAAGGTGCGCTGGCTTGCGAATACTATCTGCGCTGTTTGCAGGCGGCTCCCCCGGCAGAA ATACAGCATTATCTGGCGGCGAGTGAGATTGCGCGTTTTGCACAGGAACAAAATAGCGAAGAGGAGGGCGTATGGGATCA GGCACAGTGCAACAACTTGGTCGAATTGGCCAATGTTGTCATGGCACTGCCGGAATGGTCGGGTATCATCGCCAATAACT TGCAGGGAAGTGATACGTATCTTTTTAACCTGGCCGTTTCCGCTAGCCGGTTACGCCAGCAGGATCCGTGGGAGAGTATT TTCGCGCGGCAGTTGGCGGATGCAGCAGATAACAATTGGTACCAGTTAATGCAGACTGCCCAGCCTGAGCATATCGCCAG AGTGATATCGCTGGCTGAACAGCAGTTGGATTTAGAGGCTATCGCTTCCGGGCCAGGAATGGCTATGGGGCTCGGGTTGG AGTACCAGCAGCATCAGGCATTGGATTTTGTACTGCAGGATCTGAAAAAATTCCCAGGAATGGGCTGGTCATTGTTGGCG GTGGGGTTACGTAGTGAGAGGATCCGTGACCGGTCTATGGCGCTAAACGCATTGGACGTTTGGCCTCAGGATGATTGGTC GCCTGATATGTCACAGGCGTTGGCGGATAGTTTATGTCATGAGCCCGATGAACAGATGCGGGAGCGTTTGCATAAGTTAT GTGTCAATCTTGGGATCACCACGGGCTGA
Upstream 100 bases:
>100_bases AGGCCAATGTTCGGCAGGCACCCCTGCCAAATAGCCCGGTTTGTCGCGACCAATCGCTGGATCAACGGCTTTATCGCACG GTGATGTTAAGGATAGAAAA
Downstream 100 bases:
>100_bases CCCAGATAGTTTTTGAAAAACGCCCTGGCAGAGATGGAAAAGCAGCAGGGCGTTAGCAAAGCATTGAAAGCTCAGTCATT ACAATGAATTGATTTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIAL LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG
Sequences:
>Translated_542_residues MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIAL LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG >Mature_542_residues MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKIRWSAGALDGVFGHHVAEADD ETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLDVLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIAL LGFFPTQKSCQILSTLGAHDEFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYAEGALACEYYLRCLQAAPPAE IQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVVMALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESI FARQLADAADNNWYQLMQTAQPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGITTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60366; Mature: 60366
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKI CHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE RWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLD EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH VLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIALLGFFPTQKSCQILSTLGAHD HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC EFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHH EGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH MALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESIFARQLADAADNNWYQLMQTA HHCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC QPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGIT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TG CC >Mature Secondary Structure MKTWIARLLGKDISIDFPAPWAADSTAIYRWLATWPDSDGPLPAEAETLPDEPSAIEGKI CHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE RWSAGALDGVFGHHVAEADDETPVEAIMAALRSVLHKPQQQDIEQLYRLLCHASPLNYLD EECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH VLLPAVAQDPQLPANKLQALAEWLATESPDRNAVKVAIALLGFFPTQKSCQILSTLGAHD HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC EFTLYAAVALRSILPEDEYERAWLAMAKRAGGWGRVQLIERLPEFLSKQSRDWLLREGYR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC NAVMYEYTAWHCATHGQLLQAMQQLKTMQKQPDAPLLLGAAEILQALINGGPAQNMHDYA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCHHHHH EGALACEYYLRCLQAAPPAEIQHYLAASEIARFAQEQNSEEEGVWDQAQCNNLVELANVV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH MALPEWSGIIANNLQGSDTYLFNLAVSASRLRQQDPWESIFARQLADAADNNWYQLMQTA HHCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC QPEHIARVISLAEQQLDLEAIASGPGMAMGLGLEYQQHQALDFVLQDLKKFPGMGWSLLA CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHH VGLRSERIRDRSMALNALDVWPQDDWSPDMSQALADSLCHEPDEQMRERLHKLCVNLGIT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC TG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA