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The map label for this gene is yfcH [H]

Identifier: 218929850

GI number: 218929850

Start: 3112316

End: 3113224

Strand: Reverse

Name: yfcH [H]

Synonym: YPO2778

Alternate gene names: 218929850

Gene position: 3113224-3112316 (Counterclockwise)

Preceding gene: 218929854

Following gene: 218929836

Centisome position: 66.9

GC content: 53.69

Gene sequence:

>909_bases
ATGCGTATTTTAATCACCGGTGCTACAGGGTTGATCGGGCGCAGCCTGACCCCCTTTCTTCTGTCGCAAGGCCACCAAAT
AACGGCCCTGACCCGCTCACTGCAGCGGGCCAATAACCTGCTCGGTCAGCAAGTGACCTACTGGCCCACTCTGGATGATC
AAGAGGATCTCAACAGTTTTGATGCCGTGATCAATCTGGCCGGAGAGCCTATCGCCGAGAAACGCTGGACCTCGCAGCAA
AAAGAGATCCTCTGCCAAAGCCGCTGGCAAATAACTGAACGCTTAGCCACGCTGATCAATGCCAGCAGCCAGCCACCAAC
CGTTTTTATTTCCGGTTCTGCGGTTGGATTTTATGGCGACCAAGGGCAGGCATTAGTCACCGAAGAAGAGCCTCCCCACG
ACGAGTTTACCCATCAATTATGTGAGCGTTGGGAAAATCTGGCACTGGCGGCGGAGAGTAGCCATACCCGAGTCTGCTTG
CTGCGTACCGGCGTCGTATTAGCGCCAGAAGGCGGCGCGCTAGCCAAGATGCTTCCTCTATTCCGCCTTGGATTAGGTGG
CCCCATGGGGGATGGTCGCCAATATCTGCCTTGGATACATCTCGAGGATATGGTGCAGGGTATTTATTATCTGCTAACCA
CCCATAATCTGCGCGGCCCGTTTAATATGGTTGCCCCCTATCCGGTCCACAATGAGCAATTTACGGCGACGCTGGCCGAT
GTTTTGGATCGCCCAGCAGCCATCCGCACACCTGCAGCGGCCATTCGTCTATTAATGGGTGAATCCGCAATATTGGTGCT
CGGTGGGCAACGGGCGTTACCGAAACGATTAGAAGAGGCGGGGTTTGGCTTTCGCTATTATGAATTGGAAGATGCACTGC
GTGATGTACTGAAAAAACCAAAGGAATAA

Upstream 100 bases:

>100_bases
GTGTCGTGGGATAAGAGCACAGAATCGCCTATGCTAAAAGAGAAAAAGAAATAGATGAGGTTGATGACTTGATAGGATTG
GATTTAAATGGAGATTGGCT

Downstream 100 bases:

>100_bases
GCCGCTGGCGTTCCCTAATAGGGGTGAGGGGTGAACCGTGAAATGGTATTCACCCCCCTAAAATACAGCTATCCATTAAT
ACAACTATCCATTAGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSFDAVINLAGEPIAEKRWTSQQ
KEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCL
LRTGVVLAPEGGALAKMLPLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATLAD
VLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKPKE

Sequences:

>Translated_302_residues
MRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSFDAVINLAGEPIAEKRWTSQQ
KEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCL
LRTGVVLAPEGGALAKMLPLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATLAD
VLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKPKE
>Mature_302_residues
MRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSFDAVINLAGEPIAEKRWTSQQ
KEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGDQGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCL
LRTGVVLAPEGGALAKMLPLFRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATLAD
VLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKPKE

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=301, Percent_Identity=35.8803986710963, Blast_Score=174, Evalue=9e-44,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=68.7919463087248, Blast_Score=427, Evalue=1e-121,
Organism=Drosophila melanogaster, GI28573846, Length=300, Percent_Identity=30, Blast_Score=145, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33500; Mature: 33500

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSF
CEEEEECCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH
DAVINLAGEPIAEKRWTSQQKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGD
HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECC
QGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCLLRTGVVLAPEGGALAKMLPL
CCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCEEEECCCCHHHHHHHH
FRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATLAD
HHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
VLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKP
HHCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCC
KE
CC
>Mature Secondary Structure
MRILITGATGLIGRSLTPFLLSQGHQITALTRSLQRANNLLGQQVTYWPTLDDQEDLNSF
CEEEEECCCHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH
DAVINLAGEPIAEKRWTSQQKEILCQSRWQITERLATLINASSQPPTVFISGSAVGFYGD
HHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECC
QGQALVTEEEPPHDEFTHQLCERWENLALAAESSHTRVCLLRTGVVLAPEGGALAKMLPL
CCCEEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCEEEECCCCHHHHHHHH
FRLGLGGPMGDGRQYLPWIHLEDMVQGIYYLLTTHNLRGPFNMVAPYPVHNEQFTATLAD
HHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
VLDRPAAIRTPAAAIRLLMGESAILVLGGQRALPKRLEEAGFGFRYYELEDALRDVLKKP
HHCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCC
KE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]