Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929833
Identifier: 218929833
GI number: 218929833
Start: 3095169
End: 3096086
Strand: Reverse
Name: 218929833
Synonym: YPO2761
Alternate gene names: NA
Gene position: 3096086-3095169 (Counterclockwise)
Preceding gene: 218929836
Following gene: 218929832
Centisome position: 66.53
GC content: 49.46
Gene sequence:
>918_bases ATGAATGTTTTATTTCCATTGTTTGCGGTGATTATTTGGTCAGTCAATGCCGTGGTGAGTAAAATCTCCGCCACCGCCAT TGATCCGGCAGCAATCTCCTTCTACCGCTGGTTACTGGCCCTGCTGACATTATCCCCATTTCTGCTGCTCGGTGTGGTCC GCAATTGGCAGGCGATACGTGTCTATTGGTGGAAATTAATGCTACTGGGGATGCTGGGCATGGTGCTGTACCAAAGCCTG GCTTACTATGCCGCCCACAGTGTCAGCGCACTGTTTATGGGGATCCTCAGTTCATTAATTCCGCTGTTGACGGTGCTTAT CAGTATTGTGTTGTTACGCGTGGCACCAACCGTTGGGATTGCTCTGGGTAGCCTGCTGTCCTTAGGGGGATTAGTTTGGT TGATCAGTGCGGGCAACCCAGTTCAACTGCTGCAACATGGGATCGGTAAAGGCGAATTAATGATGCTTGGCGCGTCAGCC TCTTATGCGCTGTATGGGGTATTAACAAAGCGCTGGGCCATTCAACTACCGAATTGGCAATCCCTTTATATGCAAATCGT TTTTGGTGTCGTGCTGCTGTTACCTGGCTTCCTGATGACCCCAGACGTGCAGCTAACGGCACAGAATATTCCTTTGGTTC TCTTTGCTGGTATTCCAGCCTCAATTCTTGCGCCTTATTTATGGATTCAAGGCGTGATGCGACTGGGTGCCAATACCGCT TCTATCTTTATGAATCTGACACCCGTATTTACTGCCATTATTGCCGTCGTCTTCTTGCATGAGCAGTTGCACAGTTATCA CTTGATTGGTGGCGGCATTACCCTTGCTGGAGTGGTGCTGGCCCAACGTCTGCGCAGCCCATTGCGGCGCAATTTAGATC TTGCTGGACATATCCCAAACAACAAAAACAGTAGATAG
Upstream 100 bases:
>100_bases ATTGTCTTAATCACCCAAGTCATTGTCTGATTATCGTTATATAGAATAAATCAGACAGCTGTAGACTACACCGCATATTT TTTAGTTAAGAATTATTATC
Downstream 100 bases:
>100_bases CGGCAAGACTTCTGGTAGAACCCCAAGTGGGTATAAATATGTATACCCAAAATAATTCGAGTGGCAGGAAGATGGCAACT GCGTCAGTCCCCAGGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRVYWWKLMLLGMLGMVLYQSL AYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIALGSLLSLGGLVWLISAGNPVQLLQHGIGKGELMMLGASA SYALYGVLTKRWAIQLPNWQSLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTA SIFMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVLAQRLRSPLRRNLDLAGHIPNNKNSR
Sequences:
>Translated_305_residues MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRVYWWKLMLLGMLGMVLYQSL AYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIALGSLLSLGGLVWLISAGNPVQLLQHGIGKGELMMLGASA SYALYGVLTKRWAIQLPNWQSLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTA SIFMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVLAQRLRSPLRRNLDLAGHIPNNKNSR >Mature_305_residues MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIRVYWWKLMLLGMLGMVLYQSL AYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGIALGSLLSLGGLVWLISAGNPVQLLQHGIGKGELMMLGASA SYALYGVLTKRWAIQLPNWQSLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTA SIFMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVLAQRLRSPLRRNLDLAGHIPNNKNSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33235; Mature: 33235
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIR CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VYWWKLMLLGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGSLLSLGGLVWLISAGNPVQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQ HHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHEECCCHH SLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTA HHHHHHHHHHHHHHCCHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH SIFMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVLAQRLRSPLRRNLDLAGHIPN HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCEECCCC NKNSR CCCCC >Mature Secondary Structure MNVLFPLFAVIIWSVNAVVSKISATAIDPAAISFYRWLLALLTLSPFLLLGVVRNWQAIR CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VYWWKLMLLGMLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIVLLRVAPTVGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGSLLSLGGLVWLISAGNPVQLLQHGIGKGELMMLGASASYALYGVLTKRWAIQLPNWQ HHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHEECCCHH SLYMQIVFGVVLLLPGFLMTPDVQLTAQNIPLVLFAGIPASILAPYLWIQGVMRLGANTA HHHHHHHHHHHHHHCCHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH SIFMNLTPVFTAIIAVVFLHEQLHSYHLIGGGITLAGVVLAQRLRSPLRRNLDLAGHIPN HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCEECCCC NKNSR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]