Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is aroC [H]
Identifier: 218929823
GI number: 218929823
Start: 3083736
End: 3084821
Strand: Direct
Name: aroC [H]
Synonym: YPO2751
Alternate gene names: 218929823
Gene position: 3083736-3084821 (Clockwise)
Preceding gene: 218929822
Following gene: 218929824
Centisome position: 66.26
GC content: 52.21
Gene sequence:
>1086_bases ATGGCTGGGAACAGTATTGGGCAGTTTTTCCGCGTCACCACTTTTGGTGAATCTCACGGTATCGCCCTAGGATGCATTAT TGATGGTGTACCACCGGGCATTCCGATTACCGAGGCTGATATTCAGTTGGATCTTGACCGTCGCCGTCCGGGGACTTCTC GTTATACCACTCAGCGCCGTGAGCTGGATCAAGTTCGCATTTTATCCGGCGTATTTGAGGGCGTCACTACGGGGACCAGT ATCGGGTTAATGATTGAAAATACGGATCAGCGTTCGCAAGATTACAGCGCAATTAAAGATGTGTTCCGCCCCGGTCATGC TGATTATACCTATGAGCAAAAATACGGTGTACGGGATTACCGTGGTGGTGGCCGCTCTTCAGCCCGCGAAACCGCGATGC GGGTGGCGGCGGGCGCTATTGCTAAAAAGTATTTAGCACAAAAATTTGGTGTACAGGTGCGTGGTTATCTGGCGCAAATG GGGGATGTTAGCTGTGATTTGCTCGATTGGGATTTGGTCGAGCAAAATCCATTCTTTTGCCCCGATGCCAGCAAACTGGA GCCGCTGGATGCCCTAATGCGTGAGCTGAAAAAAGCCGGTGACTCCATTGGTGCCAAAATCACCGTCGTCGCTGAAAATG TCCCCGTAGGTTTAGGTGAGCCGGTATTTGATCGTTTGGATGCGGATCTTGCTCATGCATTGATGAGTATCAACGCGGTA AAAGGGGTGGAAATTGGCGATGGTTTTGCTGTCGTCACTAAGCGTGGCAGTGAAAACCGTGATGAAATTACTCCGCAGGG CTTCCAAAGTAATCATGCTGGCGGCATTTTAGGGGGGATTAGCAGCGGGCAGCCGGTTGTTGCTCACATTGCATTAAAAC CCACCTCCAGCATTATGGTTCCGGGGCAAACTATCAATCGGCAAGGAGAAGCGGTTGAAATGGTGACCCGAGGGCGTCAT GACCCGTGTGTGGGTATCCGGGCGGTACCTATTGCAGAAGCGATGATGGCTATCGTACTTATGGATCACCTACTGCGCCA GCGCGCGCAGTGCGGCGATGTGGCTTCAGACGTTCCGCGCTGGTAG
Upstream 100 bases:
>100_bases CATTTCAGCATGTACCGTGATTAATTGATCACTTCTTATCAAGTCTGTCAGTACGGTTAATCTCTATCTGGCAGACCGCT TATGACTCAAAGGAGCCGTG
Downstream 100 bases:
>100_bases ATAGCATGAAAAATTGGATAGTGGGTATGGTGGCATTGGTCACCATGGTCCCTGTCATGGCGGCCACGCCATGGCAAAAG ATTACGCACCCGGTGGCGGG
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAGNSIGQFFRVTTFGESHGIALGCIIDGVPPGIPITEADIQLDLDRRRPGTSRYTTQRRELDQVRILSGVFEGVTTGTS IGLMIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGVRDYRGGGRSSARETAMRVAAGAIAKKYLAQKFGVQVRGYLAQM GDVSCDLLDWDLVEQNPFFCPDASKLEPLDALMRELKKAGDSIGAKITVVAENVPVGLGEPVFDRLDADLAHALMSINAV KGVEIGDGFAVVTKRGSENRDEITPQGFQSNHAGGILGGISSGQPVVAHIALKPTSSIMVPGQTINRQGEAVEMVTRGRH DPCVGIRAVPIAEAMMAIVLMDHLLRQRAQCGDVASDVPRW
Sequences:
>Translated_361_residues MAGNSIGQFFRVTTFGESHGIALGCIIDGVPPGIPITEADIQLDLDRRRPGTSRYTTQRRELDQVRILSGVFEGVTTGTS IGLMIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGVRDYRGGGRSSARETAMRVAAGAIAKKYLAQKFGVQVRGYLAQM GDVSCDLLDWDLVEQNPFFCPDASKLEPLDALMRELKKAGDSIGAKITVVAENVPVGLGEPVFDRLDADLAHALMSINAV KGVEIGDGFAVVTKRGSENRDEITPQGFQSNHAGGILGGISSGQPVVAHIALKPTSSIMVPGQTINRQGEAVEMVTRGRH DPCVGIRAVPIAEAMMAIVLMDHLLRQRAQCGDVASDVPRW >Mature_360_residues AGNSIGQFFRVTTFGESHGIALGCIIDGVPPGIPITEADIQLDLDRRRPGTSRYTTQRRELDQVRILSGVFEGVTTGTSI GLMIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGVRDYRGGGRSSARETAMRVAAGAIAKKYLAQKFGVQVRGYLAQMG DVSCDLLDWDLVEQNPFFCPDASKLEPLDALMRELKKAGDSIGAKITVVAENVPVGLGEPVFDRLDADLAHALMSINAVK GVEIGDGFAVVTKRGSENRDEITPQGFQSNHAGGILGGISSGQPVVAHIALKPTSSIMVPGQTINRQGEAVEMVTRGRHD PCVGIRAVPIAEAMMAIVLMDHLLRQRAQCGDVASDVPRW
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=361, Percent_Identity=83.6565096952909, Blast_Score=611, Evalue=1e-176, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=44.9591280653951, Blast_Score=308, Evalue=9e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 38983; Mature: 38852
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNSIGQFFRVTTFGESHGIALGCIIDGVPPGIPITEADIQLDLDRRRPGTSRYTTQRR CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEECCCEEEEECCCCCCCCHHHHHHH ELDQVRILSGVFEGVTTGTSIGLMIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGVRDY HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEHHCCCCCCC RGGGRSSARETAMRVAAGAIAKKYLAQKFGVQVRGYLAQMGDVSCDLLDWDLVEQNPFFC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCHHHCCCCCCC PDASKLEPLDALMRELKKAGDSIGAKITVVAENVPVGLGEPVFDRLDADLAHALMSINAV CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGDGFAVVTKRGSENRDEITPQGFQSNHAGGILGGISSGQPVVAHIALKPTSSIMV CCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEE PGQTINRQGEAVEMVTRGRHDPCVGIRAVPIAEAMMAIVLMDHLLRQRAQCGDVASDVPR CCHHHCCCCCCHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC W C >Mature Secondary Structure AGNSIGQFFRVTTFGESHGIALGCIIDGVPPGIPITEADIQLDLDRRRPGTSRYTTQRR CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEECCCEEEEECCCCCCCCHHHHHHH ELDQVRILSGVFEGVTTGTSIGLMIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGVRDY HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEHHCCCCCCC RGGGRSSARETAMRVAAGAIAKKYLAQKFGVQVRGYLAQMGDVSCDLLDWDLVEQNPFFC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCHHHCCCCCCC PDASKLEPLDALMRELKKAGDSIGAKITVVAENVPVGLGEPVFDRLDADLAHALMSINAV CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGDGFAVVTKRGSENRDEITPQGFQSNHAGGILGGISSGQPVVAHIALKPTSSIMV CCEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEE PGQTINRQGEAVEMVTRGRHDPCVGIRAVPIAEAMMAIVLMDHLLRQRAQCGDVASDVPR CCHHHCCCCCCHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC W C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA