Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yciQ [H]
Identifier: 218929803
GI number: 218929803
Start: 3062324
End: 3064363
Strand: Reverse
Name: yciQ [H]
Synonym: YPO2731
Alternate gene names: 218929803
Gene position: 3064363-3062324 (Counterclockwise)
Preceding gene: 218929804
Following gene: 218929802
Centisome position: 65.85
GC content: 48.68
Gene sequence:
>2040_bases ATGGCACGCTTGTCTGGCAAGGCATTATACGTTATCTGGATCTTATTGTTACTTGTGACGGGAACCGTTCAGGCTACCGC CGATGAGATTTCCGTGAGTACACCGGCTGTCGAAGCACCAAAGGGCCACGGCCTTATCCGTGCTTATGAACACATTCTAT CGTTCGATACTCATGCGCGTTTTGACGCCGATGGCAGTATGGAGATGCGTGAGAATATTAAGGTGTTGTCCCTCGGGAAA CAAATAAGCCGTGGGATTTTCCGTACGCTGCCGTTAACCTGGAACCGACAGGATGGCAAATTTTTCAGCGTCGAATATCA GATTAAAAATGTATTACGTGATGGGGTGGCCGAACCTTTTAGTGTGACGAAAGAAGGCGAAACACTGATGGTCCGTATTG GTCGCGCTGACCATATATTGAAGCCCGGTATTTATAATTATGTGATCCAATACCAAGTCAGCAATCATTTCAGCCGATTC CCCGATTGGGATGAACTGTATTGGAATGTGACAGGTAACGGCTGGGAATATCCTATTAGTAAAGCCAGTTTCCATCTGGA ATTACCCGCAAGCGAAGCGTTTCTAAATAGTGAAGGCAAAGATACCCGGTTGAGCACGATTGATGTTTATACCGGCAGGC TCGGCGAAAAAGAACAAAATGCCAAAATTCTGGCCGATGGTAGCGTACAGACGTCGCAACCACTCAAACAAGGTGAAGGT TTGACCGTCGCCTATACTTGGCCGCGCACTATTCTTGCTAACGCACCTGCACCGGAAACCTCCTCACTGTTAGTCTATCT GCTGCTGCCTACCGTGCAAACCAGCGTATTATGGATACCGATACTCCTCCTCATTGGCTATTACCTGCTTTGGTGGCGTA AAAATGTTACCGCGATTGGGCTGAAAATGCCGCCGATAGTGCCGCTCTATGCGCTCCCTGCCACGCTGTCACCGGGCTAT CTGCGTTATGTCACTCAGCGTAAATACGATGCGATTGCCTTCAGTAGCGATTTGCTGAATTTAGTCGCTCAACGTAGCGT AGCCATTAAAACAAAAAAGAGTAAAAACAAAAGCCCATGGGTTTTAAACAGCCGCGATGAACAGTGGCTATCACTCCAAT CCGATGGCAATCAGCTCGATATCCATGATAAGCAATTACTGCATACGCTGTTTAGTAGCAACCGTAAGAATATCAATCTC AGTAAGCCCCATCAGCGGCCAATGCAGAAGGCGCTGAAGTTTTTAGAGAAACGCTGTGAGGATCAGCAAGAGAAGTTATT CAGTCAATGGCTTGGGCCAATATGGCGTGGAATATTTATCATGCTATTGGTGCCCGTTATCTGCGGCCTGCTATTCAATA CGGGTATCGCCTTCATTACTATTCCCGTTTTATTGTTGCTGCTATTGGGCATCAACCTCCTTTCTTTACCGCTGAAATTT TTATTTAGCCCCAAACAAGTATTGGATAGCCGGGGGGCTCTCTCTGTATGCTTCGCGCTATTATTTGGCTTATTGGCTCT CCTTCCCGTTGGTCTTTTTATCTTTAACCTCCCCCCCTTAACCCAGTTACCGGCTGGATACTTAGGCGCTTTATTGGTTG CTATTTTGCTCTGCGTTACTTTTACCAGGATGGTACCCCGTTACACACAACGAGGGCTAAATCATCTTGCTATCGCTCGC GGACTAAAATTATATCTTGGTACCGCAGAAAGGCATCGCTATCAGGCCCTTTATCCGCCGGACAAACTGGTTGCCCATTT TGAAAGTATGTTGCCTGTGGCTTTGGCTCTCGGCGTGGGTAAAACGTGGGCGAATAGTTTTGCACAATATTTGGTCAGCA CAGGCACCCTGTCGGTGGTCTTTGCCAATGCCGACTGGAGCAGCGTGAATCACTTCAGCCAATCCTGTAGCTCATCCGCT ACGGCAACCCCCAGCCGCAGTTCTGACTCCAGTTCCAGCTCCAGTTCGAGTGGTTCAGGCTCCTCCGGCGGGGGTTCGTC TGGTGGTGGTTCTGGCGGTGGCGGCGGCGGTGGCTGGTAA
Upstream 100 bases:
>100_bases CCAAGCTTACTGTTAGCCCATTTATTTAATTTTAAAGCAGATGTATTTTTTGAACTTGAAAATCCTGATGAAGCCAAATT ACCACGGATGGAATAGCAGA
Downstream 100 bases:
>100_bases CGTTCGTCAGTCAGGGAAAAGATGGCGAATGTTCTGAATGAGAAGAATACTCATTAATTTTGTCTGTTATTGGGTATCAG TTCGATGTGTCCGTCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGK QISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRF PDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGY LRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINL SKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIAR GLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSA TATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW
Sequences:
>Translated_679_residues MARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGK QISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRF PDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGY LRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINL SKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIAR GLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSA TATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW >Mature_678_residues ARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGKQ ISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFP DWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEGL TVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGYL RYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINLS KPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKFL FSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIARG LKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSAT ATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=577, Percent_Identity=27.7296360485269, Blast_Score=194, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 74809; Mature: 74678
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPF CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHCCCCCC SVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPIS CCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEHHHHHHCCCCHHHEEEEECCCCEECCCC KASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG CCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCC LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG EEEEEECCHHHCCCCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPW EECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC VLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCE EECCCCCHHEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC DQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVG HHHHHHHHHHHCHHHHHHHHCHHHEEECHHHHCEECCCCHHHHHHHHHHHHHHHHHHHCC KTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSATATPSRSSDSSSSSSSSGSG HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SSGGGSSGGGSGGGGGGGW CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPF CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHCCCCCC SVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPIS CCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEHHHHHHCCCCHHHEEEEECCCCEECCCC KASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG CCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCC LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG EEEEEECCHHHCCCCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPW EECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC VLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCE EECCCCCHHEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC DQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVG HHHHHHHHHHHCHHHHHHHHCHHHEEECHHHHCEECCCCHHHHHHHHHHHHHHHHHHHCC KTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSATATPSRSSDSSSSSSSSGSG HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SSGGGSSGGGSGGGGGGGW CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]