Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is yciQ [H]

Identifier: 218929803

GI number: 218929803

Start: 3062324

End: 3064363

Strand: Reverse

Name: yciQ [H]

Synonym: YPO2731

Alternate gene names: 218929803

Gene position: 3064363-3062324 (Counterclockwise)

Preceding gene: 218929804

Following gene: 218929802

Centisome position: 65.85

GC content: 48.68

Gene sequence:

>2040_bases
ATGGCACGCTTGTCTGGCAAGGCATTATACGTTATCTGGATCTTATTGTTACTTGTGACGGGAACCGTTCAGGCTACCGC
CGATGAGATTTCCGTGAGTACACCGGCTGTCGAAGCACCAAAGGGCCACGGCCTTATCCGTGCTTATGAACACATTCTAT
CGTTCGATACTCATGCGCGTTTTGACGCCGATGGCAGTATGGAGATGCGTGAGAATATTAAGGTGTTGTCCCTCGGGAAA
CAAATAAGCCGTGGGATTTTCCGTACGCTGCCGTTAACCTGGAACCGACAGGATGGCAAATTTTTCAGCGTCGAATATCA
GATTAAAAATGTATTACGTGATGGGGTGGCCGAACCTTTTAGTGTGACGAAAGAAGGCGAAACACTGATGGTCCGTATTG
GTCGCGCTGACCATATATTGAAGCCCGGTATTTATAATTATGTGATCCAATACCAAGTCAGCAATCATTTCAGCCGATTC
CCCGATTGGGATGAACTGTATTGGAATGTGACAGGTAACGGCTGGGAATATCCTATTAGTAAAGCCAGTTTCCATCTGGA
ATTACCCGCAAGCGAAGCGTTTCTAAATAGTGAAGGCAAAGATACCCGGTTGAGCACGATTGATGTTTATACCGGCAGGC
TCGGCGAAAAAGAACAAAATGCCAAAATTCTGGCCGATGGTAGCGTACAGACGTCGCAACCACTCAAACAAGGTGAAGGT
TTGACCGTCGCCTATACTTGGCCGCGCACTATTCTTGCTAACGCACCTGCACCGGAAACCTCCTCACTGTTAGTCTATCT
GCTGCTGCCTACCGTGCAAACCAGCGTATTATGGATACCGATACTCCTCCTCATTGGCTATTACCTGCTTTGGTGGCGTA
AAAATGTTACCGCGATTGGGCTGAAAATGCCGCCGATAGTGCCGCTCTATGCGCTCCCTGCCACGCTGTCACCGGGCTAT
CTGCGTTATGTCACTCAGCGTAAATACGATGCGATTGCCTTCAGTAGCGATTTGCTGAATTTAGTCGCTCAACGTAGCGT
AGCCATTAAAACAAAAAAGAGTAAAAACAAAAGCCCATGGGTTTTAAACAGCCGCGATGAACAGTGGCTATCACTCCAAT
CCGATGGCAATCAGCTCGATATCCATGATAAGCAATTACTGCATACGCTGTTTAGTAGCAACCGTAAGAATATCAATCTC
AGTAAGCCCCATCAGCGGCCAATGCAGAAGGCGCTGAAGTTTTTAGAGAAACGCTGTGAGGATCAGCAAGAGAAGTTATT
CAGTCAATGGCTTGGGCCAATATGGCGTGGAATATTTATCATGCTATTGGTGCCCGTTATCTGCGGCCTGCTATTCAATA
CGGGTATCGCCTTCATTACTATTCCCGTTTTATTGTTGCTGCTATTGGGCATCAACCTCCTTTCTTTACCGCTGAAATTT
TTATTTAGCCCCAAACAAGTATTGGATAGCCGGGGGGCTCTCTCTGTATGCTTCGCGCTATTATTTGGCTTATTGGCTCT
CCTTCCCGTTGGTCTTTTTATCTTTAACCTCCCCCCCTTAACCCAGTTACCGGCTGGATACTTAGGCGCTTTATTGGTTG
CTATTTTGCTCTGCGTTACTTTTACCAGGATGGTACCCCGTTACACACAACGAGGGCTAAATCATCTTGCTATCGCTCGC
GGACTAAAATTATATCTTGGTACCGCAGAAAGGCATCGCTATCAGGCCCTTTATCCGCCGGACAAACTGGTTGCCCATTT
TGAAAGTATGTTGCCTGTGGCTTTGGCTCTCGGCGTGGGTAAAACGTGGGCGAATAGTTTTGCACAATATTTGGTCAGCA
CAGGCACCCTGTCGGTGGTCTTTGCCAATGCCGACTGGAGCAGCGTGAATCACTTCAGCCAATCCTGTAGCTCATCCGCT
ACGGCAACCCCCAGCCGCAGTTCTGACTCCAGTTCCAGCTCCAGTTCGAGTGGTTCAGGCTCCTCCGGCGGGGGTTCGTC
TGGTGGTGGTTCTGGCGGTGGCGGCGGCGGTGGCTGGTAA

Upstream 100 bases:

>100_bases
CCAAGCTTACTGTTAGCCCATTTATTTAATTTTAAAGCAGATGTATTTTTTGAACTTGAAAATCCTGATGAAGCCAAATT
ACCACGGATGGAATAGCAGA

Downstream 100 bases:

>100_bases
CGTTCGTCAGTCAGGGAAAAGATGGCGAATGTTCTGAATGAGAAGAATACTCATTAATTTTGTCTGTTATTGGGTATCAG
TTCGATGTGTCCGTCACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 678

Protein sequence:

>679_residues
MARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGK
QISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRF
PDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG
LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGY
LRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINL
SKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF
LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIAR
GLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSA
TATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW

Sequences:

>Translated_679_residues
MARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGK
QISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRF
PDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG
LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGY
LRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINL
SKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF
LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIAR
GLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSA
TATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW
>Mature_678_residues
ARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGKQ
ISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFP
DWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEGL
TVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGYL
RYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINLS
KPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKFL
FSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIARG
LKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSAT
ATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787522, Length=577, Percent_Identity=27.7296360485269, Blast_Score=194, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018702 [H]

Pfam domain/function: PF09972 DUF2207 [H]

EC number: NA

Molecular weight: Translated: 74809; Mature: 74678

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPF
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHCCCCCC
SVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPIS
CCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEHHHHHHCCCCHHHEEEEECCCCEECCCC
KASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG
CCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCC
LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG
EEEEEECCHHHCCCCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPW
EECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
VLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCE
EECCCCCHHEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH
FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVG
HHHHHHHHHHHCHHHHHHHHCHHHEEECHHHHCEECCCCHHHHHHHHHHHHHHHHHHHCC
KTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSATATPSRSSDSSSSSSSSGSG
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SSGGGSSGGGSGGGGGGGW
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPF
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHCCCCCC
SVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPIS
CCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEHHHHHHCCCCHHHEEEEECCCCEECCCC
KASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQNAKILADGSVQTSQPLKQGEG
CCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHCCCC
LTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG
EEEEEECCHHHCCCCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPW
EECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
VLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCE
EECCCCCHHEEECCCCCEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFITIPVLLLLLLGINLLSLPLKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFSPKQVLDSRGALSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH
FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVG
HHHHHHHHHHHCHHHHHHHHCHHHEEECHHHHCEECCCCHHHHHHHHHHHHHHHHHHHCC
KTWANSFAQYLVSTGTLSVVFANADWSSVNHFSQSCSSSATATPSRSSDSSSSSSSSGSG
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SSGGGSSGGGSGGGGGGGW
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]