Click here to switch to the map view.

The map label for this gene is yfiC [C]

Identifier: 218929781

GI number: 218929781

Start: 3036506

End: 3037264

Strand: Direct

Name: yfiC [C]

Synonym: YPO2709

Alternate gene names: 218929781

Gene position: 3036506-3037264 (Clockwise)

Preceding gene: 218929779

Following gene: 218929783

Centisome position: 65.25

GC content: 49.41

Gene sequence:

>759_bases
TTGGTGACTAATGTGGGCGAACAATTAAAAAAACAACCGGTATTACGTGGTGGCGGTTTCACCTTTAAACAATTCTTTGT
GGCACATGATCGCTGTGCAATGAAAGTGGGCACTGACGGCGTTCTGCTGGGGGCTTGGGTGCCGGTGTTACACGCCCGTA
GAGTTTTGGATATTGGCTGTGGCAGTGGGCTTATCGCCTTAATGATTGCCCAACGTTCATTGCCACAGGTGCAGATTGAC
GGGGTTGAACTGGAACCCGCCGCTGCGCAACAGGCGAGCAGTAATGTTGAGTTATCTCCTTGGGCTGAACGCATTCATAT
CCATCAGCAAGATATTCATCAGTTTGCTGAGAATCATCCTCATCAGTATGACCTGATTGTCAGTAACCCGCCTTACTTTG
CTCCGGCCATTGCTTGTCGAGATGAAGCCCGTGATACCGCGCGCTATACCGGGTCACTCACGCATGATGCTCTACTGAAC
TGTGCGGAGAAGCTTATCACAGAGGACGGGATGTTTTGTGTGGTTTTACCCCATGAGTTAGGAATTGAATTTGCCCGCCT
TGCTGGGCAACAGGGCTGGTTTGTCCGGTGCCAGGTTGATATCAGGGATCGCCCCGGTAAACCGTTACATCGAATGCTAC
TGACACTTTCAAGACAAGCGGGTGAGACGGTGTATCAACATTTAGCTCTGCGTCAGTCTGAAGGTGTTTACTCACCTGAG
TTTTGCCAGCTCATCAGTGATTTCTATCTAAACTATTAA

Upstream 100 bases:

>100_bases
ATACTTCAAGCTGCATGTGCGTTGCTACGATCAATCACCCGAACCGATTTGTCTCTCGCTGGCTGCCTTACTGCAATTCG
AATTATTTAGAGTATAAATT

Downstream 100 bases:

>100_bases
TTTTAAATAAAGTAATTAATTTTAAATAAAATAATTAGCGTGAAATAAGAATCGGGCGTCGTAGAGACGCCCTGAGGTTA
TTGACAAAGTGCCCGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MVTNVGEQLKKQPVLRGGGFTFKQFFVAHDRCAMKVGTDGVLLGAWVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQID
GVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACRDEARDTARYTGSLTHDALLN
CAEKLITEDGMFCVVLPHELGIEFARLAGQQGWFVRCQVDIRDRPGKPLHRMLLTLSRQAGETVYQHLALRQSEGVYSPE
FCQLISDFYLNY

Sequences:

>Translated_252_residues
MVTNVGEQLKKQPVLRGGGFTFKQFFVAHDRCAMKVGTDGVLLGAWVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQID
GVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACRDEARDTARYTGSLTHDALLN
CAEKLITEDGMFCVVLPHELGIEFARLAGQQGWFVRCQVDIRDRPGKPLHRMLLTLSRQAGETVYQHLALRQSEGVYSPE
FCQLISDFYLNY
>Mature_252_residues
MVTNVGEQLKKQPVLRGGGFTFKQFFVAHDRCAMKVGTDGVLLGAWVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQID
GVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACRDEARDTARYTGSLTHDALLN
CAEKLITEDGMFCVVLPHELGIEFARLAGQQGWFVRCQVDIRDRPGKPLHRMLLTLSRQAGETVYQHLALRQSEGVYSPE
FCQLISDFYLNY

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val)

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family

Homologues:

Organism=Escherichia coli, GI87082131, Length=241, Percent_Identity=51.8672199170125, Blast_Score=258, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRMN6_YERPB (B2KA56)

Other databases:

- EMBL:   CP001048
- RefSeq:   YP_001873424.1
- ProteinModelPortal:   B2KA56
- GeneID:   6258178
- GenomeReviews:   CP001048_GR
- KEGG:   ypb:YPTS_3010
- HOGENOM:   HBG307609
- OMA:   FKQFHIN
- ProtClustDB:   CLSK889268
- GO:   GO:0005737
- HAMAP:   MF_01872
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR007848
- InterPro:   IPR022882
- PRINTS:   PR00507

Pfam domain/function: PF05175 MTS

EC number: =2.1.1.55

Molecular weight: Translated: 28175; Mature: 28175

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTNVGEQLKKQPVLRGGGFTFKQFFVAHDRCAMKVGTDGVLLGAWVPVLHARRVLDIGC
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHHHCCCC
GSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAENHP
CCHHHHHHHHHCCCCCEEECCEEECCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHCCC
HQYDLIVSNPPYFAPAIACRDEARDTARYTGSLTHDALLNCAEKLITEDGMFCVVLPHEL
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECHHH
GIEFARLAGQQGWFVRCQVDIRDRPGKPLHRMLLTLSRQAGETVYQHLALRQSEGVYSPE
CHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FCQLISDFYLNY
HHHHHHHHHCCC
>Mature Secondary Structure
MVTNVGEQLKKQPVLRGGGFTFKQFFVAHDRCAMKVGTDGVLLGAWVPVLHARRVLDIGC
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHHHCCCC
GSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIHQFAENHP
CCHHHHHHHHHCCCCCEEECCEEECCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHCCC
HQYDLIVSNPPYFAPAIACRDEARDTARYTGSLTHDALLNCAEKLITEDGMFCVVLPHEL
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECHHH
GIEFARLAGQQGWFVRCQVDIRDRPGKPLHRMLLTLSRQAGETVYQHLALRQSEGVYSPE
CHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FCQLISDFYLNY
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA