Click here to switch to the map view.

The map label for this gene is ybgK [H]

Identifier: 218929771

GI number: 218929771

Start: 3027249

End: 3028199

Strand: Direct

Name: ybgK [H]

Synonym: YPO2699

Alternate gene names: 218929771

Gene position: 3027249-3028199 (Clockwise)

Preceding gene: 218929770

Following gene: 218929772

Centisome position: 65.05

GC content: 53.84

Gene sequence:

>951_bases
ATGTTGAATATCATCCGCGCAGGTATTTATACCACGGTTCAAGATGCTGGCCGTGGCGGTTTTCGCCGCTTGGGGATCAG
CCAAGGGGGAGCGTTAGATTTACCCGCGCTGAGTATGGCGAATATGCTGGTGGGTAACGCTAGCGATGCCGCTGGGTTAG
AAATCACCCTTGGGCAGTTTACAGCAGAATTTACCCAATCGGGTTGGATTGCCTTAACCGGTGCCGGTTGTGATGCCAGA
CTTGATGAACAGCGGCTCTGGACCGGCTGGTGCTATCCGGTTAAGGCCGGACAACAGTTAAAACTCAGTGTGCCGCACCG
CGGTATGCGCAGTTATCTGGCTCTTTCTGGCGGTATTATCGTGCCAGAAATACTGGGTTCACGCAGCACCGATTTGAAAG
CCGGGTTTGGTGGTCATCAGGGGCGGTTGATTAAAGAAGGCGACCGCCTGCCATTGGGTAAACCCACCCGTTTGCCCAGT
GAATCTGTTGGCGTTAAACAGCTATTATTCGGTAACCGTGTCCGTGCCGTGCCGGGACCGGAATACCACGAATTCGATGA
GGTTGCGCGGAATGCTTTTTGGCGAGAAGCCTGGCAGCTCAGTCCGCAAAGTAACCGCATGGGATACCGCCTGAGTGGCC
GCGAATTAACGCGTAACACCACGCGTGAAATGCTATCTCATGGTCTATTGCCCGGTGTGGTGCAGGTTCCCCATAACGGC
CAGCCGATTGTATTGATGGCTGATGCACAAACGACCGGCGGCTACCCACGGATTGCTTGCGTGATTGAGGCGGATCTCTA
CCACTTGGCGCAAATTCGGCTGGGTGAGCCGATACATTTTGTACCATGTACTGTGGAAGAAGCACTACGCGCCAAAAGAG
AGCAACAGCATTTCCTACAGCAAATTGAATGGGGTTTAGAGAAGGGTTTTGTTACCCCGGAGGCCCAGTGA

Upstream 100 bases:

>100_bases
TTGGTCGCACCTCACTGGCATTGTTTAATCCAGTGGCGATGCCACCGACCTTATTGCGACCTGGGGATAATGTGCGCTTT
CTGCCGCTAAAGGAGGGCGT

Downstream 100 bases:

>100_bases
AAATTGATTTAAATGCTGATTTGGGTGAGGGCTGCGCCAATGATCAGGCGCTGCTGCAATTGGTCAGTTCGGCCAACATA
GCCTGCGGTTTTCATGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQFTAEFTQSGWIALTGAGCDAR
LDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGIIVPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPS
ESVGVKQLLFGNRVRAVPGPEYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALRAKREQQHFLQQIEWGLEKGFVTPEAQ

Sequences:

>Translated_316_residues
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQFTAEFTQSGWIALTGAGCDAR
LDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGIIVPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPS
ESVGVKQLLFGNRVRAVPGPEYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALRAKREQQHFLQQIEWGLEKGFVTPEAQ
>Mature_316_residues
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQFTAEFTQSGWIALTGAGCDAR
LDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGIIVPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPS
ESVGVKQLLFGNRVRAVPGPEYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALRAKREQQHFLQQIEWGLEKGFVTPEAQ

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=308, Percent_Identity=68.5064935064935, Blast_Score=446, Evalue=1e-126,
Organism=Saccharomyces cerevisiae, GI6319685, Length=325, Percent_Identity=28.3076923076923, Blast_Score=118, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34647; Mature: 34647

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQF
CCCEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHH
TAEFTQSGWIALTGAGCDARLDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGII
HHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCEE
VPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPSESVGVKQLLFGNRVRAVPGP
EHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCC
EYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEECCCCC
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALRAKREQQHFLQ
CCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
QIEWGLEKGFVTPEAQ
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLNIIRAGIYTTVQDAGRGGFRRLGISQGGALDLPALSMANMLVGNASDAAGLEITLGQF
CCCEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHH
TAEFTQSGWIALTGAGCDARLDEQRLWTGWCYPVKAGQQLKLSVPHRGMRSYLALSGGII
HHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHCCCEE
VPEILGSRSTDLKAGFGGHQGRLIKEGDRLPLGKPTRLPSESVGVKQLLFGNRVRAVPGP
EHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCC
EYHEFDEVARNAFWREAWQLSPQSNRMGYRLSGRELTRNTTREMLSHGLLPGVVQVPHNG
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEECCCCC
QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFVPCTVEEALRAKREQQHFLQ
CCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
QIEWGLEKGFVTPEAQ
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]