| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is kch [H]
Identifier: 218929748
GI number: 218929748
Start: 3000971
End: 3002146
Strand: Direct
Name: kch [H]
Synonym: YPO2675
Alternate gene names: 218929748
Gene position: 3000971-3002146 (Clockwise)
Preceding gene: 218929746
Following gene: 218929751
Centisome position: 64.49
GC content: 41.41
Gene sequence:
>1176_bases ATGAAAACATTACGGGAATTTAGAGCTAAGGTATCGGTACCCATTTTTCTTGCCATTTTGGTGGCAATTAACGGGTATCT GATTTTAAGCCCGCTACTCTATCGGGCGATTGCACATTCAAGCGATGCAATAAATAACTTCAATACTTGGAAGGAGGCGT TAAGTTTTCTGGAATTATTCGAAATCCCGCAATTTATGATCGGTCTGGTCTTGATGTTGATGGCATATGCACTATCAATG AAAACCCGTACAGCATGGTTTTTATCGGTATTGCTGCTATTTACTCTTGTTGCCATCAATATTTTTATCGCGAAAAAATA TGATAGCCTGACGATTTACTCCATCGTGATTATCTTAGCACTGCTCTTTTATTGGCGGCGGTTTGATTATTACAGTCTTG GCAGCGGTACATTCTTTGCTGTTGTGAGTATCGCTTCATTAATCGTCTATAGCATGTTGGGTACGCTCTATATGGGTGAT GAATTTGCCCCCGTAGTGACTGATTTATCTACAGCATTCTATTTCGCGATAGTGTGTATGTCGACGGTGGGGTTCGGGGA TATTATCCCGCATACCACTGTGGCGAGAATGTTTACTCTTACGGTGATTATTGCTGGTATAACTGTTTTTGCTACCTCAG TGGCTTCGATTGCCGGCCCGATGATCAGTAATAATATCAAACGCATAGTTAAAGGTAGGATTTCTCACGTGGAACGTAAA AATCATTTTATTATTGTCGGTACCAACTCTTTGGCACTGAATGTATATAAAGGTCTGCGTGACCGGGGTGATGATGTCAC TGTGGTTTGTGCGGTAGGTAGCCAACATGATTTCCCTTCCGATGCTGATATTATCGAGGGTGACCCTTCTTCTGTTGCCA CGCTAAAATTAGCCGGTGCGGCGAAGGCAAAATATATTATCGTGTTGTGTAACAATGATGCTGATAACACCTTTACCATT TTAGCGGCTAAAGAAATTTCGGGTGAGGGGACGAAAATACTGGCATTAGTCAATGAAACTCAGAATATAGAAAAAGTTAA AAGAGTCAATCCAGACATGGTCTTCTCTTTGCCATTGTTAGGCAGTGAGTTACTGGTCAGGACTCTGAATGGCGATACCA TCAATAATACCCTTATTACGGAAATGTTCTTTGGTCATTGCCAGAAACTGGATTGA
Upstream 100 bases:
>100_bases TATCATTTGATTTCTATCAAAAATAATTTAATTTAATCATGATTTTTCTCATTTCTTATCTATACTAAAATTACCTATAA CAATTCTAGTTACTCTATCG
Downstream 100 bases:
>100_bases TATCATTAATAGCCCACTATCACTGTGTTTATATCAAAACACCCTCGGTTAAGTGAGGGTGTTTTTTTTGTCACGAGCCT TGGTTTTTATGGGCTATTTA
Product: voltage-gated potassium channel
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKTLREFRAKVSVPIFLAILVAINGYLILSPLLYRAIAHSSDAINNFNTWKEALSFLELFEIPQFMIGLVLMLMAYALSM KTRTAWFLSVLLLFTLVAINIFIAKKYDSLTIYSIVIILALLFYWRRFDYYSLGSGTFFAVVSIASLIVYSMLGTLYMGD EFAPVVTDLSTAFYFAIVCMSTVGFGDIIPHTTVARMFTLTVIIAGITVFATSVASIAGPMISNNIKRIVKGRISHVERK NHFIIVGTNSLALNVYKGLRDRGDDVTVVCAVGSQHDFPSDADIIEGDPSSVATLKLAGAAKAKYIIVLCNNDADNTFTI LAAKEISGEGTKILALVNETQNIEKVKRVNPDMVFSLPLLGSELLVRTLNGDTINNTLITEMFFGHCQKLD
Sequences:
>Translated_391_residues MKTLREFRAKVSVPIFLAILVAINGYLILSPLLYRAIAHSSDAINNFNTWKEALSFLELFEIPQFMIGLVLMLMAYALSM KTRTAWFLSVLLLFTLVAINIFIAKKYDSLTIYSIVIILALLFYWRRFDYYSLGSGTFFAVVSIASLIVYSMLGTLYMGD EFAPVVTDLSTAFYFAIVCMSTVGFGDIIPHTTVARMFTLTVIIAGITVFATSVASIAGPMISNNIKRIVKGRISHVERK NHFIIVGTNSLALNVYKGLRDRGDDVTVVCAVGSQHDFPSDADIIEGDPSSVATLKLAGAAKAKYIIVLCNNDADNTFTI LAAKEISGEGTKILALVNETQNIEKVKRVNPDMVFSLPLLGSELLVRTLNGDTINNTLITEMFFGHCQKLD >Mature_391_residues MKTLREFRAKVSVPIFLAILVAINGYLILSPLLYRAIAHSSDAINNFNTWKEALSFLELFEIPQFMIGLVLMLMAYALSM KTRTAWFLSVLLLFTLVAINIFIAKKYDSLTIYSIVIILALLFYWRRFDYYSLGSGTFFAVVSIASLIVYSMLGTLYMGD EFAPVVTDLSTAFYFAIVCMSTVGFGDIIPHTTVARMFTLTVIIAGITVFATSVASIAGPMISNNIKRIVKGRISHVERK NHFIIVGTNSLALNVYKGLRDRGDDVTVVCAVGSQHDFPSDADIIEGDPSSVATLKLAGAAKAKYIIVLCNNDADNTFTI LAAKEISGEGTKILALVNETQNIEKVKRVNPDMVFSLPLLGSELLVRTLNGDTINNTLITEMFFGHCQKLD
Specific function: May play a role in the defense against osmotic shock [H]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787503, Length=332, Percent_Identity=39.1566265060241, Blast_Score=232, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 43098; Mature: 43098
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLREFRAKVSVPIFLAILVAINGYLILSPLLYRAIAHSSDAINNFNTWKEALSFLELF CCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH EIPQFMIGLVLMLMAYALSMKTRTAWFLSVLLLFTLVAINIFIAKKYDSLTIYSIVIILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LLFYWRRFDYYSLGSGTFFAVVSIASLIVYSMLGTLYMGDEFAPVVTDLSTAFYFAIVCM HHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH STVGFGDIIPHTTVARMFTLTVIIAGITVFATSVASIAGPMISNNIKRIVKGRISHVERK HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NHFIIVGTNSLALNVYKGLRDRGDDVTVVCAVGSQHDFPSDADIIEGDPSSVATLKLAGA CCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC AKAKYIIVLCNNDADNTFTILAAKEISGEGTKILALVNETQNIEKVKRVNPDMVFSLPLL CCEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCC GSELLVRTLNGDTINNTLITEMFFGHCQKLD CHHHHHEECCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTLREFRAKVSVPIFLAILVAINGYLILSPLLYRAIAHSSDAINNFNTWKEALSFLELF CCCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH EIPQFMIGLVLMLMAYALSMKTRTAWFLSVLLLFTLVAINIFIAKKYDSLTIYSIVIILA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LLFYWRRFDYYSLGSGTFFAVVSIASLIVYSMLGTLYMGDEFAPVVTDLSTAFYFAIVCM HHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH STVGFGDIIPHTTVARMFTLTVIIAGITVFATSVASIAGPMISNNIKRIVKGRISHVERK HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NHFIIVGTNSLALNVYKGLRDRGDDVTVVCAVGSQHDFPSDADIIEGDPSSVATLKLAGA CCEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECC AKAKYIIVLCNNDADNTFTILAAKEISGEGTKILALVNETQNIEKVKRVNPDMVFSLPLL CCEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCEEECCCC GSELLVRTLNGDTINNTLITEMFFGHCQKLD CHHHHHEECCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8170937; 9097039; 9278503 [H]