Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218929593

Identifier: 218929593

GI number: 218929593

Start: 2814576

End: 2815118

Strand: Reverse

Name: 218929593

Synonym: YPO2504

Alternate gene names: NA

Gene position: 2815118-2814576 (Counterclockwise)

Preceding gene: 218929594

Following gene: 218929592

Centisome position: 60.49

GC content: 38.86

Gene sequence:

>543_bases
ATGCCAGGTCGTATTCAAGAAATGCCTCAATCATGGCTTACCGCTAGCCGGCCCGTTACAGAAATTGTAAAGCAACCATC
AACGGGTTTGGTAAAAGACAGTAGTCTTAATAAAGATATAAAAACTGAAGAGACAGAACAATTTCTGGAGGAAATAGACG
CCCAGATGAAAGTTATTTGCGCCTGGGAAATGGACAGTACCACTGTGGACCAATGTATTAAAGAGTTATGCGATAAAATA
GGGGCATTGTATAACGATGTATTAACTACTCGAAGCCAGGTCTATGAAATGGTTTTAAATTACGGGACAGAAAGTGGTCA
AATGGTGCGCTTAAGAGAAGGATGTAACGCAGCCGATAGAGACCGCTATTTAGAAAAATTGATCGCTTACAATCATATTC
GTCAGGCTGTTAGTGATAAAGTCGCGAAGATAGAAAAACATACGGACTCAGTAAAACGAATGGTTGATTTACATCATTAT
GATTATATTTGTGGTGACTTAAAGGCACTAAATAAAAATGGTGACGTACCTAAACAGTCATGA

Upstream 100 bases:

>100_bases
ATAAAAGAATATCCCCTAAAAATAATTAATACTCCTTATCAACATTGAGCGTCCTTATTTTTCACCCAATAAGGGCTTAA
CCACCACAAGGAGTTATTCT

Downstream 100 bases:

>100_bases
TTCAGATTAGATAATTTACTTATCGTAAATAACTAGACTTTATCTTTAACATATACACTATGTTGACGGGTTATTTCTTT
CGTAATCATATTGAAATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPGRIQEMPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTEETEQFLEEIDAQMKVICAWEMDSTTVDQCIKELCDKI
GALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADRDRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHY
DYICGDLKALNKNGDVPKQS

Sequences:

>Translated_180_residues
MPGRIQEMPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTEETEQFLEEIDAQMKVICAWEMDSTTVDQCIKELCDKI
GALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADRDRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHY
DYICGDLKALNKNGDVPKQS
>Mature_179_residues
PGRIQEMPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTEETEQFLEEIDAQMKVICAWEMDSTTVDQCIKELCDKIG
ALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADRDRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHYD
YICGDLKALNKNGDVPKQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20545; Mature: 20413

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRIQEMPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTEETEQFLEEIDAQMKVIC
CCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
AWEMDSTTVDQCIKELCDKIGALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCHH
DRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHYDYICGDLKALNKNGDVPKQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PGRIQEMPQSWLTASRPVTEIVKQPSTGLVKDSSLNKDIKTEETEQFLEEIDAQMKVIC
CCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
AWEMDSTTVDQCIKELCDKIGALYNDVLTTRSQVYEMVLNYGTESGQMVRLREGCNAADR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCHH
DRYLEKLIAYNHIRQAVSDKVAKIEKHTDSVKRMVDLHHYDYICGDLKALNKNGDVPKQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA