Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929558
Identifier: 218929558
GI number: 218929558
Start: 2769322
End: 2769654
Strand: Reverse
Name: 218929558
Synonym: YPO2469
Alternate gene names: NA
Gene position: 2769654-2769322 (Counterclockwise)
Preceding gene: 218929560
Following gene: 218929557
Centisome position: 59.51
GC content: 48.05
Gene sequence:
>333_bases ATGTTAAATCGTCGCCTAAATTTGTTTGACCGAGTTCACTGCCGCACAGGCAGCTTAGAAAGTGGAATGGCTATTGCTAT CGCTCGAGAATATGTTCACTGCCGCACAGGCAGCTTAGAAATCGCGAACGCGCTCAGGTTCACGGAATGGCGAGTTCACT GCCGCACAGGCAGCTTAGAAAATCTGCGCCAAAGAAAATGCCATTCAGATAATGTTCACTGCTGCACAGGCAGCTTAGAA AAACTACTAGAAGCTTGCCCATCTTACCTTTTCGTTCACTGCCGCACAGGCAGCTTAGAAAATCATGAAAGACATTGTTC GCCAGTCCCCTGA
Upstream 100 bases:
>100_bases ATTCAGGCATTGAGTTCACTGCCGCACAGGCAGCTTAGAAACTGATGGGTAACTTTAATCCCAAATTCTTTTTGTTCACT GCCGCACAGGCAGCTTAGAA
Downstream 100 bases:
>100_bases GTTCACTGCCGCACAGGCAATAATCAAATCCTGGGCCATGTGCTGATGCTATTTGGGGAGCAAAATTGCGAGCGGAAGCG CATTTTGTAACTGACAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MLNRRLNLFDRVHCRTGSLESGMAIAIAREYVHCRTGSLEIANALRFTEWRVHCRTGSLENLRQRKCHSDNVHCCTGSLE KLLEACPSYLFVHCRTGSLENHERHCSPVP
Sequences:
>Translated_110_residues MLNRRLNLFDRVHCRTGSLESGMAIAIAREYVHCRTGSLEIANALRFTEWRVHCRTGSLENLRQRKCHSDNVHCCTGSLE KLLEACPSYLFVHCRTGSLENHERHCSPVP >Mature_110_residues MLNRRLNLFDRVHCRTGSLESGMAIAIAREYVHCRTGSLEIANALRFTEWRVHCRTGSLENLRQRKCHSDNVHCCTGSLE KLLEACPSYLFVHCRTGSLENHERHCSPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12608; Mature: 12608
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRRLNLFDRVHCRTGSLESGMAIAIAREYVHCRTGSLEIANALRFTEWRVHCRTGSLE CCCCCCCHHHHHHCCCCCCCCCEEHEEEHHHHHHCCCCCHHHHHHHHHHEEEEECCCCHH NLRQRKCHSDNVHCCTGSLEKLLEACPSYLFVHCRTGSLENHERHCSPVP HHHHHCCCCCCCEEECHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLNRRLNLFDRVHCRTGSLESGMAIAIAREYVHCRTGSLEIANALRFTEWRVHCRTGSLE CCCCCCCHHHHHHCCCCCCCCCEEHEEEHHHHHHCCCCCHHHHHHHHHHEEEEECCCCHH NLRQRKCHSDNVHCCTGSLEKLLEACPSYLFVHCRTGSLENHERHCSPVP HHHHHCCCCCCCEEECHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA