Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218929552
Identifier: 218929552
GI number: 218929552
Start: 2760947
End: 2761951
Strand: Reverse
Name: 218929552
Synonym: YPO2463
Alternate gene names: NA
Gene position: 2761951-2760947 (Counterclockwise)
Preceding gene: 218929553
Following gene: 218929551
Centisome position: 59.35
GC content: 48.26
Gene sequence:
>1005_bases ATGGCTAAAGCAACGATTAAAACCGCTTCTGTACTGGCATTTGAACGTAAGTTATCCAATTCCGACGCCATGATGTATGC CGGTAACTGGGGGCAAACCGACAACTGGCAGCCTATCATCATTAAAGAAAAAGCGGTGCGGGGCACCATCTCCAACCGGT TGAAAAATGCCCTGGCATCTGATCCGGCAAAACTGGATGCAGAGATCCAAAAAGCAAACTTACAACGTGTGGATGTGGCC GCACTGCCGTTTGATACTGACACCCTGAAAATGAGTTTTACACTGCGGGTGCTGGGCAACCTCGCTACGCCATCAGTATG TAATGATCAGGAATATCAGGCTGAACTGGCCAGTGTTATTAATGGCTATATCAGTGAGCAGAGTTTTAGTGTGCTGGCGG CGCGCTATGCCGAGAATCTGGCTAATGGCCGTTTCTTGTGGCGCAACCGGGTCGGGGCTGAAGATATTAAAGTGTGTATC ACCAGCCAAACGAAGAGTTATCAATTTGATAGCAATGAATTTAGCTTGCGTCAATTTAGCCAACCCAGCAAGGAACTGAC TGCGCTGGCACAAGAAATAGAACAAGGTTTAGCGGGCAACGGTTTTGCCTTTTTCACCGTTGATGCTTTTGTTCGTTTAG GTAACGGGCAGGAAGTGTTCCCGTCTCAGGAGTTGGTGCTGGACAGCAACAGTAAGAAAAGCAAAGTGTTATATCAGATT GATGGTATTGCGGCCCTGCATTCACAGAAAGTGGGTAATGCGTTACGTACCATTGATGATTGGTATCCAGATGCCACTGA GTTGGCTTTGGGGCCGATTGCCGTTGAACCCTATGGCTCGGTGACCAGCCGGGGTAAAGCCTATCGGCAGCCAAAACAAA AAATGGATTTCTACACCTTATTGGACAACTGGGTGACAAAAGGCACGGTACCGGCGGTCGAACAGCAACATTATGTGATG GCAACCTTGATCCGTGGTGGTGTCTTTGGTGAGAAAGGCGAATAA
Upstream 100 bases:
>100_bases ATCACCAGGAAGGCGATAATTACCTCTGTCGCTGTGCACTCCCGGCATCGGTTGATACCTATCTATTAAATGATGAAGAA TAATTTTAAAGGATCTAAAA
Downstream 100 bases:
>100_bases AGGAGGGGGCATGGATCATTATCTTGATATACGTGTGCTTCCTGATCCTGAATTTAGCGCTCAGACGTTATTGGAAGCCT TGTTTGCTAAATTACACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Csy3 Family Protein; Csy3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein; Crispr-Associated Protein; Crispr-Associated Protein Csy3 Family; CRISPR-Associated Cas5e Family Protein
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPAKLDAEIQKANLQRVDVA ALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCI TSQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVM ATLIRGGVFGEKGE
Sequences:
>Translated_334_residues MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPAKLDAEIQKANLQRVDVA ALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCI TSQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVM ATLIRGGVFGEKGE >Mature_333_residues AKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPAKLDAEIQKANLQRVDVAA LPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCIT SQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQID GIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVMA TLIRGGVFGEKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36902; Mature: 36771
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALAS CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHC DPAKLDAEIQKANLQRVDVAALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVI CCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEHHCCCCCCCCCCHHHHHHHHHHH NGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCITSQTKSYQFDSNEFSLRQFS HHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCHHHHHC QPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI CCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHEECCCCCCCCCCEEEECCCCCCCEEEEEE DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTL CCHHHHHHHHHHHHHHHHHHCCCCHHHHEECCEEECCCCCHHHCCHHHHCHHHHHHHHHH LDNWVTKGTVPAVEQQHYVMATLIRGGVFGEKGE HHHHHCCCCCCCHHCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALAS CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHC DPAKLDAEIQKANLQRVDVAALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVI CCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEHHCCCCCCCCCCHHHHHHHHHHH NGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCITSQTKSYQFDSNEFSLRQFS HHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCEEECCCCCHHHHHC QPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQI CCHHHHHHHHHHHHHCCCCCCEEEEEEEEHHEECCCCCCCCCCEEEECCCCCCCEEEEEE DGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTL CCHHHHHHHHHHHHHHHHHHCCCCHHHHEECCEEECCCCCHHHCCHHHHCHHHHHHHHHH LDNWVTKGTVPAVEQQHYVMATLIRGGVFGEKGE HHHHHCCCCCCCHHCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA