| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928997
Identifier: 218928997
GI number: 218928997
Start: 2120994
End: 2121209
Strand: Reverse
Name: 218928997
Synonym: YPO1878
Alternate gene names: NA
Gene position: 2121209-2120994 (Counterclockwise)
Preceding gene: 218928998
Following gene: 218928996
Centisome position: 45.58
GC content: 47.22
Gene sequence:
>216_bases ATGGCATTACAAGGAAAGTTTGTTGTTAACAATGCTCACTACTCCCCTTTGAGTATTTTTGGTGTTGGTACATTTATGGC CTTTTCTGGCAATAAGGCATACCGCAACAGAGGCGGCTGTACCATGGTCCCTGATAACGGCCATTACCCGAGGGGTGCTA CTGGATTGTTGAGCGCCCTAAAGGCGGGGTTAAAACCCGCATTAATACCGCAATGA
Upstream 100 bases:
>100_bases ATAAGTTATGTTTTGGTTGTTTCGTTACTCACTTGGATAAGTGATTTGCTTTACAATGCAATAGACGCAAGACAGTATTA AATAAAAATATGAGGACACT
Downstream 100 bases:
>100_bases AAGATTTCCCCACCAAGTTTACCCATGCGCCGACTGACCATAATGAATGGTTTGGCTTGTACCGTGATGATGGGAAAATT GACGATTACACTTGGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGHYPRGATGLLSALKAGLKPALIPQ
Sequences:
>Translated_71_residues MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGHYPRGATGLLSALKAGLKPALIPQ >Mature_70_residues ALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGHYPRGATGLLSALKAGLKPALIPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7482; Mature: 7351
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGHYPRGATGLLSAL CCCCCCEEECCCCCCCEEEEECEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHH KAGLKPALIPQ HHCCCCCCCCC >Mature Secondary Structure ALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGHYPRGATGLLSAL CCCCCEEECCCCCCCEEEEECEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHH KAGLKPALIPQ HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA