| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is pabB [H]
Identifier: 218928895
GI number: 218928895
Start: 2019159
End: 2020535
Strand: Reverse
Name: pabB [H]
Synonym: YPO1773
Alternate gene names: 218928895
Gene position: 2020535-2019159 (Counterclockwise)
Preceding gene: 218928897
Following gene: 218928894
Centisome position: 43.42
GC content: 51.13
Gene sequence:
>1377_bases ATGTGTGAGAAATTTTTAACCGTCAAAGAGTTACCTTATCACCCTGATGCCCTGCTTCAACAATTCACCCCACTTGCCAA CCAAGCTTGGGCGATGTTGTTGCACTCAGGATTTGCTCAACACCCCCATAGTCGCTTTGATATCTTGGTCGCTGATCCAA AAATAACGCTGACAACTCATGGGGATAAAACGGTTATTGTCAGTGATCAGGGGCAGGAAACCTCCCTCGCGGATCCCTTC TCTTTGCTGCAGCAGCAACTGGATAAATTCGCCCCAGCGATGCCTGCTCACCCTGATCTGCCGTTTCAGGGCGGAGCGTT AGGGCTATTTGGTTACGACTTAGGCCGCCGAGTTGAAAAATTGCCTGAACTGGCGGCGCACGATATCGCCTTGCCGGATA TGGCCATTGGCCTGTATGACTGGGCGCTCATTGCTGACCACTCTCGGCAGAAGCTCACGCTGGTATCCCTTGGCGATGCC GAACAGCGCTTGCATTGGCTGCATCAGCAAACAACCGATGAGAACCTCGTCCCCTTCAAACTCACGGTTCCATGGCAGGC AGATATGTCACGGGAGCAGTACGGCGAAAAATTCCGCCAAATTCAAGCGTATCTGCGTAGCGGTGACTGTTACCAAATCA ATCTGGCACAAAGATTCAGCGCAGAGTATCAGGGGGATGAATGGCAAGCATTTCTGTCACTGAGTCGTAGCAATCAAGCC CCCTTTTCAGCTTTTATTCGCTTACCCGACAACGCCATATTGAGTGTTTCACCAGAACGTTTCTTGTGGTTGGAGAATCA TCAGGTTCAAACCCGGCCGATTAAAGGTACGCTACCCCGTTTGGCCGATCCTGAGCAGGATCGCCAGCAAGCTGAGCGAT TGGCGAATTCAGCCAAAGATCAGGCTGAAAATCTCATGATTGTGGACTTACTGCGTAACGATATTGGCCGTGTCGCACGT CCGGGTAGCGTCCGCGTACCAGAGCTGTTTGTGGTGGAGCCTTTTCCTGCGGTGCACCACTTAGTCAGTACAATTACCGC AATACTTCCCCCAGAATGTTCGCCGACCGAATTACTGCGCGCCTGTTTCCCCGGCGGGTCAATTACTGGTGCCCCCAAGG TCCGAGCAATGGAAATTATTGAACAACTCGAACCCTATCGACGCAATGCTTATTGCGGTAACATTGGCTACATAAGTTGC TGCGGCACCATGGATACCAATATTACTATCCGTACCCTGATGACAGAGAACGGTAAGATATATTGTTCTGCCGGAGGGGG GATTGTCGCCGACAGCCAAGAGCAAGCTGAATATCAAGAAACGTTCGATAAGGTCGCCCGTATTTTACCGCAACTGGGGG AGTGTGTTATTTCGTGA
Upstream 100 bases:
>100_bases GCCACCACTGTCTTAGTGATTTATGCAGCCTTGTAGCCCATTGCCAACATGTACATAAGACATCTCTTTATGACCATTCG AAAGAAAAGAATAGCGACCT
Downstream 100 bases:
>100_bases GTGAATTAATTACTGGGCAGTACTTGTCCGAGTTTATTAACCGTTTCCAACTACAACTGCCGCAACCCGATAATGTTTTG ACTCATAGTCACTATTTTTC
Product: para-aminobenzoate synthase component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MCEKFLTVKELPYHPDALLQQFTPLANQAWAMLLHSGFAQHPHSRFDILVADPKITLTTHGDKTVIVSDQGQETSLADPF SLLQQQLDKFAPAMPAHPDLPFQGGALGLFGYDLGRRVEKLPELAAHDIALPDMAIGLYDWALIADHSRQKLTLVSLGDA EQRLHWLHQQTTDENLVPFKLTVPWQADMSREQYGEKFRQIQAYLRSGDCYQINLAQRFSAEYQGDEWQAFLSLSRSNQA PFSAFIRLPDNAILSVSPERFLWLENHQVQTRPIKGTLPRLADPEQDRQQAERLANSAKDQAENLMIVDLLRNDIGRVAR PGSVRVPELFVVEPFPAVHHLVSTITAILPPECSPTELLRACFPGGSITGAPKVRAMEIIEQLEPYRRNAYCGNIGYISC CGTMDTNITIRTLMTENGKIYCSAGGGIVADSQEQAEYQETFDKVARILPQLGECVIS
Sequences:
>Translated_458_residues MCEKFLTVKELPYHPDALLQQFTPLANQAWAMLLHSGFAQHPHSRFDILVADPKITLTTHGDKTVIVSDQGQETSLADPF SLLQQQLDKFAPAMPAHPDLPFQGGALGLFGYDLGRRVEKLPELAAHDIALPDMAIGLYDWALIADHSRQKLTLVSLGDA EQRLHWLHQQTTDENLVPFKLTVPWQADMSREQYGEKFRQIQAYLRSGDCYQINLAQRFSAEYQGDEWQAFLSLSRSNQA PFSAFIRLPDNAILSVSPERFLWLENHQVQTRPIKGTLPRLADPEQDRQQAERLANSAKDQAENLMIVDLLRNDIGRVAR PGSVRVPELFVVEPFPAVHHLVSTITAILPPECSPTELLRACFPGGSITGAPKVRAMEIIEQLEPYRRNAYCGNIGYISC CGTMDTNITIRTLMTENGKIYCSAGGGIVADSQEQAEYQETFDKVARILPQLGECVIS >Mature_458_residues MCEKFLTVKELPYHPDALLQQFTPLANQAWAMLLHSGFAQHPHSRFDILVADPKITLTTHGDKTVIVSDQGQETSLADPF SLLQQQLDKFAPAMPAHPDLPFQGGALGLFGYDLGRRVEKLPELAAHDIALPDMAIGLYDWALIADHSRQKLTLVSLGDA EQRLHWLHQQTTDENLVPFKLTVPWQADMSREQYGEKFRQIQAYLRSGDCYQINLAQRFSAEYQGDEWQAFLSLSRSNQA PFSAFIRLPDNAILSVSPERFLWLENHQVQTRPIKGTLPRLADPEQDRQQAERLANSAKDQAENLMIVDLLRNDIGRVAR PGSVRVPELFVVEPFPAVHHLVSTITAILPPECSPTELLRACFPGGSITGAPKVRAMEIIEQLEPYRRNAYCGNIGYISC CGTMDTNITIRTLMTENGKIYCSAGGGIVADSQEQAEYQETFDKVARILPQLGECVIS
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=446, Percent_Identity=66.5919282511211, Blast_Score=605, Evalue=1e-174, Organism=Escherichia coli, GI1787518, Length=395, Percent_Identity=33.9240506329114, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1786809, Length=217, Percent_Identity=24.8847926267281, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87082077, Length=205, Percent_Identity=27.3170731707317, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=443, Percent_Identity=31.6027088036117, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6324361, Length=395, Percent_Identity=27.5949367088608, Blast_Score=148, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 51246; Mature: 51246
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEKFLTVKELPYHPDALLQQFTPLANQAWAMLLHSGFAQHPHSRFDILVADPKITLTTH CCCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEC GDKTVIVSDQGQETSLADPFSLLQQQLDKFAPAMPAHPDLPFQGGALGLFGYDLGRRVEK CCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH LPELAAHDIALPDMAIGLYDWALIADHSRQKLTLVSLGDAEQRLHWLHQQTTDENLVPFK HHHHHHHCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEE LTVPWQADMSREQYGEKFRQIQAYLRSGDCYQINLAQRFSAEYQGDEWQAFLSLSRSNQA EECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCHHHHHHHHHCCCCC PFSAFIRLPDNAILSVSPERFLWLENHQVQTRPIKGTLPRLADPEQDRQQAERLANSAKD CCEEEEECCCCCEEEECCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH QAENLMIVDLLRNDIGRVARPGSVRVPELFVVEPFPAVHHLVSTITAILPPECSPTELLR HHCCEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHH ACFPGGSITGAPKVRAMEIIEQLEPYRRNAYCGNIGYISCCGTMDTNITIRTLMTENGKI HHCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCEE YCSAGGGIVADSQEQAEYQETFDKVARILPQLGECVIS EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCEKFLTVKELPYHPDALLQQFTPLANQAWAMLLHSGFAQHPHSRFDILVADPKITLTTH CCCCCCCHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEC GDKTVIVSDQGQETSLADPFSLLQQQLDKFAPAMPAHPDLPFQGGALGLFGYDLGRRVEK CCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH LPELAAHDIALPDMAIGLYDWALIADHSRQKLTLVSLGDAEQRLHWLHQQTTDENLVPFK HHHHHHHCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEE LTVPWQADMSREQYGEKFRQIQAYLRSGDCYQINLAQRFSAEYQGDEWQAFLSLSRSNQA EECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCHHHHHHHHHCCCCC PFSAFIRLPDNAILSVSPERFLWLENHQVQTRPIKGTLPRLADPEQDRQQAERLANSAKD CCEEEEECCCCCEEEECCCCEEEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH QAENLMIVDLLRNDIGRVARPGSVRVPELFVVEPFPAVHHLVSTITAILPPECSPTELLR HHCCEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHH ACFPGGSITGAPKVRAMEIIEQLEPYRRNAYCGNIGYISCCGTMDTNITIRTLMTENGKI HHCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCCCCEEEEEEEECCCEE YCSAGGGIVADSQEQAEYQETFDKVARILPQLGECVIS EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]