Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928779
Identifier: 218928779
GI number: 218928779
Start: 1868941
End: 1869201
Strand: Reverse
Name: 218928779
Synonym: YPO1643
Alternate gene names: NA
Gene position: 1869201-1868941 (Counterclockwise)
Preceding gene: 218928780
Following gene: 218928778
Centisome position: 40.17
GC content: 45.98
Gene sequence:
>261_bases ATGTCATCAATTAACCAAACATCTGTTCGCGCTCACACAGGTGAAACTGGTGCAAACTTACCTGGTGAAGATCATTTGAT CGCCCATGAAGCTTTGCTTGTCGCCTTAATGGTTGAATGCGCGAATGAGTCAGATAACGATCAGTTCCTGCTTAGCATCC GAGAAACGCTGAACGGCATTTTAAGTTCCTCACGTTATCTTGATGCCAATGCTATTGCGAATGGCCTTATTGATGAGGCC GATGACAAGGCCAACCGCTAG
Upstream 100 bases:
>100_bases TGTTACCCCTATCCCGACTGGGAGGTGATTTATCATAGCAATAATCTAAAACCTCGCTATAGTGGGTAGGTGGTTATCCA ATTATTAAATAAGGAGTTTT
Downstream 100 bases:
>100_bases CATTCAGCCTTCAATACATTCATTCCTCAATACATTCATTCCTCAATACATTCAGCCCTCAATATTGAGGGCGTTTTACT GCTGCCTGCCAAGCCCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSSINQTSVRAHTGETGANLPGEDHLIAHEALLVALMVECANESDNDQFLLSIRETLNGILSSSRYLDANAIANGLIDEA DDKANR
Sequences:
>Translated_86_residues MSSINQTSVRAHTGETGANLPGEDHLIAHEALLVALMVECANESDNDQFLLSIRETLNGILSSSRYLDANAIANGLIDEA DDKANR >Mature_85_residues SSINQTSVRAHTGETGANLPGEDHLIAHEALLVALMVECANESDNDQFLLSIRETLNGILSSSRYLDANAIANGLIDEAD DKANR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9223; Mature: 9092
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSINQTSVRAHTGETGANLPGEDHLIAHEALLVALMVECANESDNDQFLLSIRETLNGI CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSSSRYLDANAIANGLIDEADDKANR HHCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSINQTSVRAHTGETGANLPGEDHLIAHEALLVALMVECANESDNDQFLLSIRETLNGI CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSSSRYLDANAIANGLIDEADDKANR HHCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA