| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928657
Identifier: 218928657
GI number: 218928657
Start: 1722674
End: 1723930
Strand: Reverse
Name: 218928657
Synonym: YPO1516
Alternate gene names: NA
Gene position: 1723930-1722674 (Counterclockwise)
Preceding gene: 218928658
Following gene: 218928656
Centisome position: 37.04
GC content: 48.45
Gene sequence:
>1257_bases TTGATGGCAACACAAGGTTCCTTGCCGATACCTGAATACAGCCGCAATATGCGGCTGATTGGTCACAGTGACCAAGGTGG CAAACCAGACGGTGTACAAGTTATGGTGCATAGGGGCTATGCCTATGTCGGCCATATGGTATCGAAAGGCGTATCAATTA TTGACGTAAGGGATGCCAAAAACCCGCGTCCCGCAGGTTTCATCGCTGCGCCTCCGAATACCTGGAATGTGCATCTGCAA ACTCATGATGATCTGCTGCTGGTGATTAATGCACGCGACCTATTTGCCGATGCCCGTTTTGCCGAAGAGAAAGTCTATTA CACCCGTTCAGTCGCCGAAACAGTCAGCACGCGTCAGGAAGGCCGCAATTGGAGCGCGGGTTTACGTATTTTTGATATTT CAACGCCAGACAAGCCACGAGAAATCAGTTTCTTACCGCTTGATGGCATTGGTATCCATCGAATCTGGTATGTCGGTGGG CGTTGGGCGTATGTATCGGCACTGTTAGATGGTTATAGCGATTATATCTTCCTCACCATTGATCTGGCTGATCCGCAAAA GCCACAGGTTGCCGGGCGCTATGCGTTACCTGGTATGGATACTGCGGCAGGTGAACAGCCTAACTGGCCAGCAGGCAAAC GCTATGCGCTGCATCATGCCATTATTAGTGGCGATACCGCTTACGGCAGTTGGCGTGATGGTGGCCTAACCTTATTGGAT GTCAGTGATCGTCACGAACCGAAACTAATAAGCCACCGTAATTGGAGCCCCCCCTTTGGCGGCGGTACTCATACTGCTTT GCCACTCCCTGATCGTGATTTATTGGTAGTACTGGATGAGGCCGTGCTGGATAACCAAGAAGATGGCGAGAAACATATCT GGGTGTTTGATATTCGTGAACCAAGTAACCCGGTGAGTATTTCAACGTTTCCGGTTCCGGAAGAACGAGATTATATAAAA AAAGGCGCTCATTTTGGCCCACACAATCTGCATGAAAACCGCCCAGGTAGTTTTATCAGTTCATCTCTGATTTTTGCTAC TTACCAAAATGCTGGGGTCCGAGCTTACGATATCAGTAACCCCTATAATCCAAAAGAAACTGGCGCGTTAGTTCCAGCAG CCCCCGAAAAAATGATGGATAAGCGCCCTGGTCGCCCACAAATTATTCAATCATGTGATGTATTTGTTGACACTCAAGGC ATCATCTACAGTACCGATTATAACGGCGGCCTCTCTATCATCGAATATTTAGGTTAA
Upstream 100 bases:
>100_bases TAAGTAAGATTATCCCCGGTTGGGGTCAGTCTGATGATTTCAACTCTCCTTGGTTTGCGACCCTTGCAGCCCAAAATGGT CAATAGATTTGGAGTAAGTA
Downstream 100 bases:
>100_bases CTATCAATCACCCAAGTTAACCATCAAGTAGTTTGGATGTTTATTAACCACTTAGGTTGATCGTAAACTCCTTGAGCTAA TCAGAAACTACTTGGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MMATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQ THDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGG RWAYVSALLDGYSDYIFLTIDLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLD VSDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIK KGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYNPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQG IIYSTDYNGGLSIIEYLG
Sequences:
>Translated_418_residues MMATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQ THDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGG RWAYVSALLDGYSDYIFLTIDLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLD VSDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIK KGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYNPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQG IIYSTDYNGGLSIIEYLG >Mature_418_residues MMATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAKNPRPAGFIAAPPNTWNVHLQ THDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQEGRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGG RWAYVSALLDGYSDYIFLTIDLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLD VSDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIREPSNPVSISTFPVPEERDYIK KGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISNPYNPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQG IIYSTDYNGGLSIIEYLG
Specific function: Unknown
COG id: COG5276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46374; Mature: 46374
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAK CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC NPRPAGFIAAPPNTWNVHLQTHDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQE CCCCCEEEECCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHEEHHHHHHHHHHHHC GRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRWAYVSALLDGYSDYIFLTI CCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEE DLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLD ECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEE VSDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIRE CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEEEECC PSNPVSISTFPVPEERDYIKKGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISN CCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCC PYNPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGIIYSTDYNGGLSIIEYLG CCCCHHCCEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCEEEEECCCCCHHHHHHCC >Mature Secondary Structure MMATQGSLPIPEYSRNMRLIGHSDQGGKPDGVQVMVHRGYAYVGHMVSKGVSIIDVRDAK CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC NPRPAGFIAAPPNTWNVHLQTHDDLLLVINARDLFADARFAEEKVYYTRSVAETVSTRQE CCCCCEEEECCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHEEHHHHHHHHHHHHC GRNWSAGLRIFDISTPDKPREISFLPLDGIGIHRIWYVGGRWAYVSALLDGYSDYIFLTI CCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEE DLADPQKPQVAGRYALPGMDTAAGEQPNWPAGKRYALHHAIISGDTAYGSWRDGGLTLLD ECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEE VSDRHEPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKHIWVFDIRE CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEEEEECC PSNPVSISTFPVPEERDYIKKGAHFGPHNLHENRPGSFISSSLIFATYQNAGVRAYDISN CCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCEEEEECCC PYNPKETGALVPAAPEKMMDKRPGRPQIIQSCDVFVDTQGIIYSTDYNGGLSIIEYLG CCCCHHCCEECCCCCHHHHHCCCCCCHHHHCCCEEEECCCEEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA