| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928631
Identifier: 218928631
GI number: 218928631
Start: 1690140
End: 1690763
Strand: Reverse
Name: 218928631
Synonym: YPO1490
Alternate gene names: NA
Gene position: 1690763-1690140 (Counterclockwise)
Preceding gene: 218928634
Following gene: 218928595
Centisome position: 36.33
GC content: 33.49
Gene sequence:
>624_bases ATGGGCCTTTCATTGAGCTGTATAAAAACCGTAGACGACTATGTAAAACATTTGGATTGTAATCGTGTTTTACCATCCAA AACCTTGGGTAAATTGAAAATCAACAAAAACATTATAAATGCTGAGACCCAACATACTATTAATGACATTAAACAAAAAT TATCCCTTATTCAAGAACGCTATAACGCCTCAACAACAGCTGAGTTTTATTTTGTCGAAAACCAACTAACCGACATGCAT GAGAGTATTAGTCAAAGGAAAGAGGATTTATACGAACCGGAGGACTATTCTTTGAGTGGGGTACAAGAGAGAGAATTGAA AAAAGGAAAAACGGCACAGGATCGTAATAATTTAGTCAAAGATCTGGTTGCGTTATATCAAATAAAAAATGCCATCAAAG AGATGATCCCAGAAGATAAGACTAAAACTATTGATGATTATAGTACCTATTATCCAAAGCCCATTCATAATGGAAAAGTA TTAGACATTCACCACCCATTCTATTCTTTAGTTGAAGAAAGTGTAAAACATAAATTATTTTCTGATTTATACGCAATTGA AAATAACAGAAAGGTCCCTTACGTCACTTACTCTAACGGATGGGATGAGGTTGATTATAAATAA
Upstream 100 bases:
>100_bases ATAAGCAACTTGATTTATTTGAAAGATTGCTTTCTGTGTTTAATCAATAATATCTCGGTAGCAATCAGTCATCATTTATT AAAACCACCAGGAGAGTAAT
Downstream 100 bases:
>100_bases ATAACATGGCATAAACTGTAGTTAACTAATCCGTATTATTCATTGGTGTTAATACAGTTTAAAGGTCGCGCTCCAGCAGG ATCACCCCGCTGTGAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MGLSLSCIKTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQERYNASTTAEFYFVENQLTDMH ESISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVKDLVALYQIKNAIKEMIPEDKTKTIDDYSTYYPKPIHNGKV LDIHHPFYSLVEESVKHKLFSDLYAIENNRKVPYVTYSNGWDEVDYK
Sequences:
>Translated_207_residues MGLSLSCIKTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQERYNASTTAEFYFVENQLTDMH ESISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVKDLVALYQIKNAIKEMIPEDKTKTIDDYSTYYPKPIHNGKV LDIHHPFYSLVEESVKHKLFSDLYAIENNRKVPYVTYSNGWDEVDYK >Mature_206_residues GLSLSCIKTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQERYNASTTAEFYFVENQLTDMHE SISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVKDLVALYQIKNAIKEMIPEDKTKTIDDYSTYYPKPIHNGKVL DIHHPFYSLVEESVKHKLFSDLYAIENNRKVPYVTYSNGWDEVDYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24141; Mature: 24009
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSLSCIKTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQER CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHH YNASTTAEFYFVENQLTDMHESISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVK HCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH DLVALYQIKNAIKEMIPEDKTKTIDDYSTYYPKPIHNGKVLDIHHPFYSLVEESVKHKLF HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH SDLYAIENNRKVPYVTYSNGWDEVDYK HHHHHHCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure GLSLSCIKTVDDYVKHLDCNRVLPSKTLGKLKINKNIINAETQHTINDIKQKLSLIQER CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHH YNASTTAEFYFVENQLTDMHESISQRKEDLYEPEDYSLSGVQERELKKGKTAQDRNNLVK HCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH DLVALYQIKNAIKEMIPEDKTKTIDDYSTYYPKPIHNGKVLDIHHPFYSLVEESVKHKLF HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH SDLYAIENNRKVPYVTYSNGWDEVDYK HHHHHHCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA