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The map label for this gene is yccT [C]

Identifier: 218928588

GI number: 218928588

Start: 1635580

End: 1636260

Strand: Reverse

Name: yccT [C]

Synonym: YPO1442

Alternate gene names: 218928588

Gene position: 1636260-1635580 (Counterclockwise)

Preceding gene: 218928590

Following gene: 218928587

Centisome position: 35.16

GC content: 44.35

Gene sequence:

>681_bases
ATGAAACTTGGTCTGGTTGCAGGGATGTTGGCCGTCTGCTTTAGTTTTTCCTCTGTCGCGATGACATTAAAACTCACGCC
AGAAATTGACCTGCTCGTCGTCGATGGCAAAAATATGTCTGGCTCCTTATTGAAAGGTGCGGATAGTTTGGAATTAAACA
GTGGTATGCATCAGATTCTGTTTAAAGTGATAAAGCCGCTACCTACAGACCCCTTAGTTCTTTATTCTTCGCCACCATTA
ATCGTAGTGTTTAATGCTCATAATACTCGGTCAGTTGCCATAAAATTACCGGTAATTAACACCCTACGAGATGGGCATCA
ATTCTCCAAAAATCCTTTATATCAACTTATTGGCGACAATGGGCACCCGTTATCTGTACGTCACGACGTTTTACGCCAAG
ACCATCTAAATAATAGTACGACTCTTGAAACAGTAATGGCGGCATATAATGTTGGGAAATACAACGCATCCGTCCCCGCG
TTTGCGGCAATCCCCCCCTCACCGGTGAGTGCAGTGCCCGGTACGACAATTCCGGTTGCTGGCGTCAATACCCCACATAA
AACGGCCAGTTTGCAAGGTGAAAATGTCACCGAACAAATGCTGCAATATTGGTTCTTGCAAGCAAATCCAGAAACCCAGA
AACGTTTCCTGATATGGGCAAAAAAACAACCTATCCACTAA

Upstream 100 bases:

>100_bases
ATGATCCGAATAGTAAACAAATACAATGGATTGGAAAGACTTTGACACATGATCTGGCTTACCTGACAATGTAAGCGAGT
ATCACCTTAAGGAGTAACAC

Downstream 100 bases:

>100_bases
AAAGCACGCCACTTATTAGCGAGTTAACCTCTGTCATCGGCACCATTTCCCCCAGAGCCGTGTTTAATCATCAGGTTATG
CCTACTTTCTCGCATTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQILFKVIKPLPTDPLVLYSSPPL
IVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDNGHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPA
FAAIPPSPVSAVPGTTIPVAGVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH

Sequences:

>Translated_226_residues
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQILFKVIKPLPTDPLVLYSSPPL
IVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDNGHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPA
FAAIPPSPVSAVPGTTIPVAGVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH
>Mature_226_residues
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQILFKVIKPLPTDPLVLYSSPPL
IVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDNGHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPA
FAAIPPSPVSAVPGTTIPVAGVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=230, Percent_Identity=36.5217391304348, Blast_Score=148, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1442_YERPE (Q8ZG70)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AC0176
- RefSeq:   NP_670029.1
- RefSeq:   NP_992699.1
- RefSeq:   YP_002346463.1
- GeneID:   1147675
- GeneID:   1174282
- GeneID:   2767308
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1442
- KEGG:   ypk:y2728
- KEGG:   ypm:YP_1333
- HOGENOM:   HBG473849
- OMA:   DPIVVTF
- ProtClustDB:   PRK03641
- BioCyc:   YPES187410:Y2728-MONOMER
- BioCyc:   YPES214092:YPO1442-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 24613; Mature: 24613

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQIL
CCCHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCHHHHH
FKVIKPLPTDPLVLYSSPPLIVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDN
HHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCHHHHHCCCCCCCCCCEEEECCC
GHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPAFAAIPPSPVSAVPGTTIPVA
CCEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
GVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH
CCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQIL
CCCHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCHHHHH
FKVIKPLPTDPLVLYSSPPLIVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDN
HHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCHHHHHCCCCCCCCCCEEEECCC
GHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPAFAAIPPSPVSAVPGTTIPVA
CCEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCEEEEC
GVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH
CCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430