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The map label for this gene is ycbX [H]

Identifier: 218928565

GI number: 218928565

Start: 1609348

End: 1610460

Strand: Reverse

Name: ycbX [H]

Synonym: YPO1417

Alternate gene names: 218928565

Gene position: 1610460-1609348 (Counterclockwise)

Preceding gene: 218928574

Following gene: 218928561

Centisome position: 34.61

GC content: 48.79

Gene sequence:

>1113_bases
ATGGTGATTACCCTCTCCCGACTTTACGTTCATCCGGTGAAATCTATGCGTGGTTTGCAGCTTTCCCACGCCCAGGTTAG
CCGCAGCGGGCTGGCCTTTGACCGCGTATTTATGATCACCGAACCGGACGGCATGTTCATTACTGCACGCCAATATCCGA
AGATGGTGATGTTTACCCCCGCATTAATGGCGGACGGTTTATATCTCACCGCACCCGATGGCGAGAGTGCCAGTATCCGC
TTTAATGATTTTTTAGCCAATCCCGCCCCCACTGAAGTTTGGGGAAATCATTTTACTGCGTTAATTGCACCCGAGGCGAT
CAACAGTTGGTTAAGTGGTTATTTTCAGCGTGACGTACAACTGCGTTGGGTCGGCACAGAATTAACACGTCGGGTCAAAC
CGTTGCCGGAGGTTCCCCTCTCTTTTGCTGATGGCTTCCCTTATCTGCTGATTAACGAAGCGTCATTTAAAGATTTGCAG
CAACGTTGCCCCGCCAGTATTAAACTGGAACAGTTTCGTCCGAATTTAGTGATTACGGGTACCACGGCCTTTGCCGAAGA
TTGCTGGCAGGTTATTCGGATAGGCGATATCACATTTGATTTAGTCAAACCTTGCAGCCGCTGTGTATTAACGACCGTCA
GTGTTGAGCGTGGGCAAAAACATCCAGCCGGCGAACCATTGCGAACATTACAGACGTTCCGAACTGCGGAGAATGGTGAT
GTCGATTTTGGCCAGAATATGGTGGCCAGGAACAGCGGTATTATTCGAGTTGGCGACGAAGTTGAAGTTCTGATCACCAA
ACCGCCAAGACCCTACGGTGCCGGAGCCGTTGTTGAAAGCCTTAGTGCGCCGCAGGATCAGTCAAAAACGGTATCCATTG
AATATAATGGCATCCGCTTTAACGGCAATAATCAACAAATACTATTGGAACAGTTAGAACAGCAGAATATCCGCATCCCT
TATTCGTGTCGGGCCGGGATATGTGGCAGTTGCAGAGTTACATTACTCACTGGCGATGTTGCTGCACTCAAAAAAAGCGC
CGTTGGTAACGATGGAACCATTCTTTGTTGCAGTTGCATCCCTAAAGGCGATATTTCCCTTAGTGGCAAATAA

Upstream 100 bases:

>100_bases
TATCGCACTATCACCAAAAAGAAAATTGTTGCGCATTATAGCTAATCCCAGCAGCTTGTCATAAAGTTGCTCCCTCTAAT
TTAATACTCACACGGAGGTA

Downstream 100 bases:

>100_bases
CCGCATTCAAAAACACACCGACACATTATACCGCACGGTCATACGCTGTTGTGGTGTTAACCTCTTCAACCATAAGTGGT
AATAAACGGTTATTCATTAT

Product: putative iron-sulfur binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MVITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGMFITARQYPKMVMFTPALMADGLYLTAPDGESASIR
FNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQLRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQ
QRCPASIKLEQFRPNLVITGTTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGD
VDFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFNGNNQQILLEQLEQQNIRIP
YSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIPKGDISLSGK

Sequences:

>Translated_370_residues
MVITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGMFITARQYPKMVMFTPALMADGLYLTAPDGESASIR
FNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQLRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQ
QRCPASIKLEQFRPNLVITGTTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGD
VDFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFNGNNQQILLEQLEQQNIRIP
YSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIPKGDISLSGK
>Mature_370_residues
MVITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGMFITARQYPKMVMFTPALMADGLYLTAPDGESASIR
FNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQLRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQ
QRCPASIKLEQFRPNLVITGTTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGD
VDFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRFNGNNQQILLEQLEQQNIRIP
YSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCIPKGDISLSGK

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=289, Percent_Identity=32.5259515570934, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI31542713, Length=281, Percent_Identity=28.8256227758007, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI157388923, Length=277, Percent_Identity=25.2707581227437, Blast_Score=90, Evalue=3e-18,
Organism=Escherichia coli, GI1787179, Length=366, Percent_Identity=69.1256830601093, Blast_Score=546, Evalue=1e-157,
Organism=Caenorhabditis elegans, GI17540702, Length=285, Percent_Identity=28.0701754385965, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17561286, Length=283, Percent_Identity=28.6219081272085, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71990971, Length=291, Percent_Identity=29.2096219931272, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25147498, Length=238, Percent_Identity=23.9495798319328, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45550400, Length=288, Percent_Identity=28.4722222222222, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI17647607, Length=251, Percent_Identity=25.4980079681275, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40748; Mature: 40748

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGMFITARQYPKMVMFTP
CEEEEEEHHHHHHHHHCCCEEHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEH
ALMADGLYLTAPDGESASIRFNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQ
HHHHCCEEEECCCCCCCEEEEHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCEE
LRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQRCPASIKLEQFRPNLVITG
EEEECHHHHHHCCCCCCCCCHHCCCCCEEEEECCCHHHHHHHCCCCEEEECCCCCEEEEE
TTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGD
CHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEHHCCCCCCCCCHHHHHHHHHCCCCCC
VDFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRF
CCCCCCHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEEE
NGNNQQILLEQLEQQNIRIPYSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCI
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEECC
PKGDISLSGK
CCCCEEECCC
>Mature Secondary Structure
MVITLSRLYVHPVKSMRGLQLSHAQVSRSGLAFDRVFMITEPDGMFITARQYPKMVMFTP
CEEEEEEHHHHHHHHHCCCEEHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEH
ALMADGLYLTAPDGESASIRFNDFLANPAPTEVWGNHFTALIAPEAINSWLSGYFQRDVQ
HHHHCCEEEECCCCCCCEEEEHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCEE
LRWVGTELTRRVKPLPEVPLSFADGFPYLLINEASFKDLQQRCPASIKLEQFRPNLVITG
EEEECHHHHHHCCCCCCCCCHHCCCCCEEEEECCCHHHHHHHCCCCEEEECCCCCEEEEE
TTAFAEDCWQVIRIGDITFDLVKPCSRCVLTTVSVERGQKHPAGEPLRTLQTFRTAENGD
CHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEHHCCCCCCCCCHHHHHHHHHCCCCCC
VDFGQNMVARNSGIIRVGDEVEVLITKPPRPYGAGAVVESLSAPQDQSKTVSIEYNGIRF
CCCCCCHHHCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCEEE
NGNNQQILLEQLEQQNIRIPYSCRAGICGSCRVTLLTGDVAALKKSAVGNDGTILCCSCI
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEECC
PKGDISLSGK
CCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]