Click here to switch to the map view.

The map label for this gene is yejH [H]

Identifier: 218928419

GI number: 218928419

Start: 1421232

End: 1422989

Strand: Reverse

Name: yejH [H]

Synonym: YPO1265

Alternate gene names: 218928419

Gene position: 1422989-1421232 (Counterclockwise)

Preceding gene: 218928423

Following gene: 218928418

Centisome position: 30.58

GC content: 52.56

Gene sequence:

>1758_bases
ATGGCGTTCACACTACGGCCTTATCAACGAGAAGCGGTCGATGCCACGGTGGCTTATTTTCGACGCCACACCACACCCGC
ACTCATTGTTCTACCAACCGGCGCAGGCAAGAGTTTAGTGATCGCAGAACTTGCGAAACTGGCCCGTGGCCGTGTGTTGG
TATTAGCGCATGTCAAAGAGTTGGTAGCACAGAATCACGCAAAATACTGCGCATACGGTCTTGAGGCCGATATCTTTGCC
GCCGGGTTGCAACAGCGACAAAGCGAGGGAAAAGTGGTCTTTGGCAGCGTGCAATCGGTGGCCCGTAATCTGCCGCTATT
TGATAGCGCATTTTCTCTGCTGATTATCGATGAATGTCATCGTATCAGCGATGAAGATGACAGCCAGTATCAGCAAATCA
TTCAGCATTTACGCACGGGGAATCCGCAGTTACGGCTGTTGGGGCTGACGGCCACCCCTTATCGGCTGGGGAAAGGCTGG
ATTTATCAGTTCCACTATCACGGTATTACTCGTGGTGATGAAAAAGCCCTGTTCCGTGACTGTATTTATGAATTACCGCT
GCGTTATATGATTAAACATGGCTTTCTGGTGCCACCTGAACGGCTGGACATGCCGGTCGTACAGTATGATTTCAGCCGCC
TGACCAGCAACAGTGATGGCTTGTTCCGTGAGGCAGATTTAGATCGAGAACTTAAGCAACAACAAAGAATTACCCCACAT
ATTGTTAGCCAAATAATCGAATATGCGGCTCAGCGTCGCGGTGTGATGATTTTTGCCGCCACCGTAGAGCACGCCAAAGA
AGTCTATGGCCTGTTGCCCAAAGGTGAAGCCGCGTTGGTCAGCGCGGGGACCCCACCTACGGAACGGGATGCGCTGATCA
ATGCCTTTAAACAGCAACAATTGCGCTATTTGGTCAATGTGTCGGTACTGACCACCGGTTTTGATGCCCCCCATGTGGAT
CTGATTGCCATTCTTCGTCCAACCGAATCCATCAGTTTATATCAACAAATTGTTGGCCGAGGCCTGCGGCTGTTTCCCGG
TAAAGAGGATTGCTTGATTCTGGATTATGCGGGTAATCCCCATGACCTTTTCACGCCAGAAGTGGGCACGAGCAAACCTC
ACAGCGGGAGCCAACCAGTACAAGTCTTCTGCCCCGATTGTGGTTTTGCCAATATCTTCTGGGGGAAATGCACTGAGTCC
GGCGAAATAATTGAGCACTATGGCCGCCGCTGTCAGGGCTGGTTTGAGGATGATCAGGGTGCACGTGCGCAATGTGACTA
CCGTTTTCGCTTTAAATCCTGCCCACATTGCGGAGCAGAAAATGATATTGCCGCCCGTCGCTGCCATCAATGCCAGGCGG
TTTTGGTCGATCCCGACGATATGCTGAAAGCCGCCCTGAAACTGAAAGATGCGCTGGTATTGCGCTGTGGCGGTATGCAG
CTAGAAACGGGCCAAGACGCCAAAGGCGAGTGGCTGAAAGCGACCTATTACGATGAGGATGGCACCAATACCAGTGAGCG
CTTCCGATTAACCACACCTGCACAACGTATGGCATTCGAACAGATATTCCTGCGCCCTCACCAGCGCGCACCGGGCATTG
CCCTAAAATGGCACACCGCCGCTGATATTATCGCGCAGCAGGCGTTGCTACGTTATCCGGATTTTGTGGTCGCCCGCCGT
CGGGGGCAGTGGTGGCAAATCAGGGAGAAGGTATTTGATTACAAGGGGCGTTTTCGGCGGGCCGATGCCCTTGCCTGA

Upstream 100 bases:

>100_bases
AATAATAGAAACTTTTTAGCTATAGGCTGAGATCAATGTCGCTTGTACAGCCCTGTAAAGTGTTGCAAATGTTGAATCCA
TCCATCTGGCAGAGACGATA

Downstream 100 bases:

>100_bases
GCCGCATTTGACCAGAGATATTCGCAGTTTTATTTGCTGTCTGAGTGATATTTCGCTAGAATGTCGCCCGCTTTACTCTG
GGTTTACCCAGCCAAAGCCG

Product: putative DEAD box helicase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKELVAQNHAKYCAYGLEADIFA
AGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECHRISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGW
IYQFHYHGITRGDEKALFRDCIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQLRYLVNVSVLTTGFDAPHVD
LIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNPHDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTES
GEIIEHYGRRCQGWFEDDQGARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTAADIIAQQALLRYPDFVVARR
RGQWWQIREKVFDYKGRFRRADALA

Sequences:

>Translated_585_residues
MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKELVAQNHAKYCAYGLEADIFA
AGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECHRISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGW
IYQFHYHGITRGDEKALFRDCIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQLRYLVNVSVLTTGFDAPHVD
LIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNPHDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTES
GEIIEHYGRRCQGWFEDDQGARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTAADIIAQQALLRYPDFVVARR
RGQWWQIREKVFDYKGRFRRADALA
>Mature_584_residues
AFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKELVAQNHAKYCAYGLEADIFAA
GLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECHRISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGWI
YQFHYHGITRGDEKALFRDCIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPHI
VSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQLRYLVNVSVLTTGFDAPHVDL
IAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNPHDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESG
EIIEHYGRRCQGWFEDDQGARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQL
ETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTAADIIAQQALLRYPDFVVARRR
GQWWQIREKVFDYKGRFRRADALA

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=584, Percent_Identity=78.4246575342466, Blast_Score=970, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320539, Length=376, Percent_Identity=27.1276595744681, Blast_Score=122, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 66216; Mature: 66084

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
CCEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHH
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
HHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCHHHHHHHEEEHHHH
RISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKALFRD
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCHHHHHHH
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
HHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHCCCHH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQ
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNP
HHHHHEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCC
HDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCC
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
CCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHEEEEEECCEE
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTA
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEEEEECHH
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA
HHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
AFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
CEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHH
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLPLFDSAFSLLIIDECH
HHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCHHHHHHHEEEHHHH
RISDEDDSQYQQIIQHLRTGNPQLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKALFRD
CCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEECCCCEEEEEEECCCCCCCHHHHHHH
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPH
HHHHCCHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHHHHCCCHH
IVSQIIEYAAQRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPTERDALINAFKQQQ
HHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKEDCLILDYAGNP
HHHHHEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHCCEEECCCCCCEEEEEECCCC
HDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCC
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQAVLVDPDDMLKAALKLKDALVLRCGGMQ
CCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHEEEEEECCEE
LETGQDAKGEWLKATYYDEDGTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTA
ECCCCCCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEEEEECHH
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA
HHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]