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The map label for this gene is yedA [H]

Identifier: 218928363

GI number: 218928363

Start: 1354247

End: 1355137

Strand: Reverse

Name: yedA [H]

Synonym: YPO1203

Alternate gene names: 218928363

Gene position: 1355137-1354247 (Counterclockwise)

Preceding gene: 218928364

Following gene: 218928357

Centisome position: 29.12

GC content: 49.94

Gene sequence:

>891_bases
ATGCTGAAGCAAAATCGCCGTAACCTGTGGTTGTTGATCGGTTCACTTTTTACCTTGTACTTCGTCTGGGGTTCAACTTA
TCTGGTTATTCGCATTGGGGTAGAAAGTTGGCCACCACTGATGATGGCCGGACTACGTTACCTAATTGCTGGCGTTTTAC
TCTTCAGTTTCCTTGCTATTCGCGGTCATGCTCTGCCTACTTTGCGGCAGTGGGCAGCAGCCAGTGCCATTGGTATCTTA
TTACTGGCAATTGGTAATGGATTAGTCACCATCGCTGAGCACCAACATGTTCCTTCCGGTATTGCTGCAGTCATGGTGGC
GACTGTTCCTCTGTTTACGTTGTGCTTCAGTTTATTATGGGGAATGCGTAACACTAAGCTGGAATGGGCAGGAATTGCTC
TCGGACTGGTTGGTATCATATTACTCAACACCGGCAGCAACCTATTGGGCAACCCGGTAGGGGCCATGCTGATATTGCTG
GCTTCCGCCAGTTGGGCATTTGGTTCAGTCTGGAGCTCCCGGTTAGCATTGCCAGCCGGTGCGATGTCTGGTGCCGCACA
AATGCTAGTGGCGGGTGTCGTGTTGCTGCTTGCCAGCACACTGAGTGGCGAAGAGTTACAGCAACCTCCGACGATGAGCG
GTATTCTCGCATTACTGTACTTAATTGTTTTTGGCTCAATGCTCGCTATCAGTGCCTATATGTTCCTGCTGAAAAATGTC
CGGCCAGCGGTTGCAACCAGCTATGCTTATGTGAACCCAGTTGTGGCGGTGTTACTGGGTATTGGTTTTGCTGGCGAAAG
CTTATCTCCCACAGAATGGGGCGCACTGGCAGTGATTGTTTCTGCCGTAGTATTGGTCACTTTGGGAAAATTTTTGTTCG
CACGCCGTTAA

Upstream 100 bases:

>100_bases
ATTAAAATATAAAAAAACAATAAAATCCTTTGCTAACCACCACTATTCTCATGTTTACTGACCCCCTGTGTTTTACCGCT
CTCTTTTTCGTTGAATAACT

Downstream 100 bases:

>100_bases
TCTCTACGTGCAAATCACTGTTGCATACTCATCATCATTACGTAGCAATTATATAACACGGTTGTTTCATACCGCGAACG
GACTATAATTCCTACTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLKQNRRNLWLLIGSLFTLYFVWGSTYLVIRIGVESWPPLMMAGLRYLIAGVLLFSFLAIRGHALPTLRQWAAASAIGIL
LLAIGNGLVTIAEHQHVPSGIAAVMVATVPLFTLCFSLLWGMRNTKLEWAGIALGLVGIILLNTGSNLLGNPVGAMLILL
ASASWAFGSVWSSRLALPAGAMSGAAQMLVAGVVLLLASTLSGEELQQPPTMSGILALLYLIVFGSMLAISAYMFLLKNV
RPAVATSYAYVNPVVAVLLGIGFAGESLSPTEWGALAVIVSAVVLVTLGKFLFARR

Sequences:

>Translated_296_residues
MLKQNRRNLWLLIGSLFTLYFVWGSTYLVIRIGVESWPPLMMAGLRYLIAGVLLFSFLAIRGHALPTLRQWAAASAIGIL
LLAIGNGLVTIAEHQHVPSGIAAVMVATVPLFTLCFSLLWGMRNTKLEWAGIALGLVGIILLNTGSNLLGNPVGAMLILL
ASASWAFGSVWSSRLALPAGAMSGAAQMLVAGVVLLLASTLSGEELQQPPTMSGILALLYLIVFGSMLAISAYMFLLKNV
RPAVATSYAYVNPVVAVLLGIGFAGESLSPTEWGALAVIVSAVVLVTLGKFLFARR
>Mature_296_residues
MLKQNRRNLWLLIGSLFTLYFVWGSTYLVIRIGVESWPPLMMAGLRYLIAGVLLFSFLAIRGHALPTLRQWAAASAIGIL
LLAIGNGLVTIAEHQHVPSGIAAVMVATVPLFTLCFSLLWGMRNTKLEWAGIALGLVGIILLNTGSNLLGNPVGAMLILL
ASASWAFGSVWSSRLALPAGAMSGAAQMLVAGVVLLLASTLSGEELQQPPTMSGILALLYLIVFGSMLAISAYMFLLKNV
RPAVATSYAYVNPVVAVLLGIGFAGESLSPTEWGALAVIVSAVVLVTLGKFLFARR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=290, Percent_Identity=66.8965517241379, Blast_Score=348, Evalue=2e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31379; Mature: 31379

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQNRRNLWLLIGSLFTLYFVWGSTYLVIRIGVESWPPLMMAGLRYLIAGVLLFSFLAI
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGHALPTLRQWAAASAIGILLLAIGNGLVTIAEHQHVPSGIAAVMVATVPLFTLCFSLLW
HCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GMRNTKLEWAGIALGLVGIILLNTGSNLLGNPVGAMLILLASASWAFGSVWSSRLALPAG
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
AMSGAAQMLVAGVVLLLASTLSGEELQQPPTMSGILALLYLIVFGSMLAISAYMFLLKNV
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPAVATSYAYVNPVVAVLLGIGFAGESLSPTEWGALAVIVSAVVLVTLGKFLFARR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKQNRRNLWLLIGSLFTLYFVWGSTYLVIRIGVESWPPLMMAGLRYLIAGVLLFSFLAI
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
RGHALPTLRQWAAASAIGILLLAIGNGLVTIAEHQHVPSGIAAVMVATVPLFTLCFSLLW
HCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GMRNTKLEWAGIALGLVGIILLNTGSNLLGNPVGAMLILLASASWAFGSVWSSRLALPAG
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
AMSGAAQMLVAGVVLLLASTLSGEELQQPPTMSGILALLYLIVFGSMLAISAYMFLLKNV
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPAVATSYAYVNPVVAVLLGIGFAGESLSPTEWGALAVIVSAVVLVTLGKFLFARR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]