| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is pgl
Identifier: 218928313
GI number: 218928313
Start: 1294517
End: 1295521
Strand: Direct
Name: pgl
Synonym: YPO1149
Alternate gene names: 218928313
Gene position: 1294517-1295521 (Clockwise)
Preceding gene: 218928311
Following gene: 218928315
Centisome position: 27.82
GC content: 51.84
Gene sequence:
>1005_bases ATGAAGCAAGCGGTTTACGTGGCAAGTCCAGACAGCCAACAAATTCATGTCTGGCAATTAGATTCAGCCGGTGAATTAAC CTTATTGCAAACCGTGGACGTGCCGGGTCAGGTACAGCCGATGGCAATAAGCCCTAATCAGCGCCATCTGTATGTCGGGG TTCGTCCTGATTTTGGTATTGTCAGCTATCACATTGCCGATGATGGTACGCTGACCGCCGCAGGTATGGCACCGCTTCCC GGCAGCCCGACTCACATTGACACCGATCGACAAGGTCGCTTCTTGTTCTCTGCTTCTTACAGTTTCAATTGCGTCAGTAT TAGCCCTATTGATACGCATGGCGTAGTGCAAGCGCCCATTCAGCAATTGGATGACCTGCCCGCGCCACATTCGGCGAATA TTGACCCAACCAACCAGATCTTGCTGGTTCCTTGCCTGAAAGAGGATAAGGTACGGCTGTTTGATTTGAGCGCGGAGGGG CAGTTAACCCCCCATGCACAGGCTGATATTACTGTTGCCGCCGGCGCTGGCCCACGTCATATGGCTTTCCACCCGAATCA TCAGGTTGCTTATTGTGTTAACGAACTCAATAGCTCGGTGGATGTGTATCAAATCAGCAATAACGGTCAGGAATACCACT TAGTGCAGAGCCTGGACGCGATGCCTGCCGATTTCACCGGGACACGTTGGGCGGCGGATATTCATATCACGCCTAATGGC CGCTATTTATACATCAGTGACCGTACCGCCAACCTGTTGGGTATTTTCACCGTTTCTGAAGATGGCCGGGTGATTTCGTT GGTCGGGCACCACCTGACCGAAGCCCAACCGCGTGGTTTCAATATCGACCACAGTGGTAATTTCCTGATTGCTTCCGGTC AGAAATCTGATCATATCGAAGTTTATCGTATCGATCAGAACACGGGGGAGCTAACCACCCTGAAACGTTATCCGGTAGGT AAGGGGCCGATGTGGGTCAGTATCCGGGGGGCGCAGAACTCATAA
Upstream 100 bases:
>100_bases AATTAACCGTTAATAAAAGATATTTGGTTAAGGCGAAGGGGCTGGAACAGGTCAATTCACCTTAATAGCGTTACCCAACA GGTTCGACTAAGGAGTAAAG
Downstream 100 bases:
>100_bases ACAATAGGCCATTTTACTGACTATTTTGAACCTGGGCAGTGCGGTCACCCTGATGTACGCTTGAGTGACTGTGCACTGCC CATGTCTAAATTGACGGCGA
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6-P-gluconolactonase
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG RYLYISDRTANLLGIFTVSEDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG KGPMWVSIRGAQNS
Sequences:
>Translated_334_residues MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG RYLYISDRTANLLGIFTVSEDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG KGPMWVSIRGAQNS >Mature_334_residues MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG RYLYISDRTANLLGIFTVSEDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG KGPMWVSIRGAQNS
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family
Homologues:
Organism=Escherichia coli, GI1786983, Length=329, Percent_Identity=56.838905775076, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): 6PGL_YERP3 (A7FKN1)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001401809.1 - ProteinModelPortal: A7FKN1 - SMR: A7FKN1 - STRING: A7FKN1 - GeneID: 5387500 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_2846 - eggNOG: COG2706 - HOGENOM: HBG741123 - OMA: LKEDRIR - ProtClustDB: PRK11028 - BioCyc: YPSE349747:YPSIP31758_2846-MONOMER - HAMAP: MF_01605 - InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 - Gene3D: G3DSA:2.130.10.10
Pfam domain/function: PF10282 DUF2394; SSF50974 N2O_reductase_N
EC number: =3.1.1.31
Molecular weight: Translated: 36446; Mature: 36446
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGI CCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE VSYHIADDGTLTAAGMAPLPGSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPI EEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHH QQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEGQLTPHAQADITVAAGAGPRH HHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC MAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG EEECCCCCEEEEEHHHCCCEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCC RYLYISDRTANLLGIFTVSEDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIE CEEEEECCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEECCCCCCEEEECCCCCCCEE VYRIDQNTGELTTLKRYPVGKGPMWVSIRGAQNS EEEEECCCCCEEEEEECCCCCCCEEEEEECCCCC >Mature Secondary Structure MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGI CCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE VSYHIADDGTLTAAGMAPLPGSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPI EEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHH QQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEGQLTPHAQADITVAAGAGPRH HHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC MAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG EEECCCCCEEEEEHHHCCCEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCC RYLYISDRTANLLGIFTVSEDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIE CEEEEECCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEECCCCCCEEEECCCCCCCEE VYRIDQNTGELTTLKRYPVGKGPMWVSIRGAQNS EEEEECCCCCEEEEEECCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA