| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928256
Identifier: 218928256
GI number: 218928256
Start: 1234752
End: 1235063
Strand: Direct
Name: 218928256
Synonym: YPO1087
Alternate gene names: NA
Gene position: 1234752-1235063 (Clockwise)
Preceding gene: 218928251
Following gene: 218928257
Centisome position: 26.53
GC content: 46.15
Gene sequence:
>312_bases TTGATGAAAACGATCAAACACTATCTGACTCCCGAGGGACGGGATTTATACATGGAGTATTTGAAGAGTCTCCGTGATTC GATCGCTAAGGCAAAAATATCATCAAGAGTTAACCGGATCGCTTCGGGGAACTTTGGGGATCATAAGCCTTGCCGTGAAG GTGTCTGGGAACTTCGTATAGACCAGGGGCCAGGTTACAGGGTTTATTACAGCCTTGTTGCGGTGAAGTCGTGTTGTTGC TTTTGGGCGGTGATAAGCGCTCGCAGAATGCCGACATCGATCAGGCTATTGTGTGTCTTAAAGATTATTTAA
Upstream 100 bases:
>100_bases GGTGGCCTTTGCATATTGGGCTACCAAGTAGGTATCGCAAATAGTGGCATGATTTATGGTGAAATCAACTTGCGAAATGT AGCCTAAAGGCTACAATATA
Downstream 100 bases:
>100_bases CGAGGTAATGATTATGGCCAAAGCCCGTTTACATGATGACGCTATGGTTCAGCTTCTTATGGAAGACCCTGAATTTGCGC AAGTATATCTGCATCAGGCT
Product: putative prophage protein
Products: NA
Alternate protein names: Prophage Protein; Phage Protein; Phage-Related Addiction Module Killer Protein; Addiction Module xin
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MMKTIKHYLTPEGRDLYMEYLKSLRDSIAKAKISSRVNRIASGNFGDHKPCREGVWELRIDQGPGYRVYYSLVAVKSCCC FWAVISARRMPTSIRLLCVLKII
Sequences:
>Translated_103_residues MMKTIKHYLTPEGRDLYMEYLKSLRDSIAKAKISSRVNRIASGNFGDHKPCREGVWELRIDQGPGYRVYYSLVAVKSCCC FWAVISARRMPTSIRLLCVLKII >Mature_103_residues MMKTIKHYLTPEGRDLYMEYLKSLRDSIAKAKISSRVNRIASGNFGDHKPCREGVWELRIDQGPGYRVYYSLVAVKSCCC FWAVISARRMPTSIRLLCVLKII
Specific function: Unknown
COG id: COG3657
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11874; Mature: 11874
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTIKHYLTPEGRDLYMEYLKSLRDSIAKAKISSRVNRIASGNFGDHKPCREGVWELRI CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEE DQGPGYRVYYSLVAVKSCCCFWAVISARRMPTSIRLLCVLKII CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MMKTIKHYLTPEGRDLYMEYLKSLRDSIAKAKISSRVNRIASGNFGDHKPCREGVWELRI CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEE DQGPGYRVYYSLVAVKSCCCFWAVISARRMPTSIRLLCVLKII CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA