Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is yaeH [C]
Identifier: 218928208
GI number: 218928208
Start: 1179885
End: 1180274
Strand: Reverse
Name: yaeH [C]
Synonym: YPO1040
Alternate gene names: 218928208
Gene position: 1180274-1179885 (Counterclockwise)
Preceding gene: 218928209
Following gene: 218928202
Centisome position: 25.36
GC content: 38.97
Gene sequence:
>390_bases ATGTATGACAATCTAAAAAGTTTAGGCATCACACAACCAGAAGATGTTGATCGCTATAGCCTGCGTCAAGAGGCCAATAA TGACATTCTGAAAATTTACTTCCGCAAAGATAAAGGGGAGTTTTTTGCCAAGAGTGTAAAATTCAAATATCCACGCCAAC GCAAGACTGTAGTGTCTGATAATGCAAGCCATGGCTATAAAGAAATCAATGAAATCAACCCTAATCTCCGCTATGTCATT GATGAGTTGGATCAGCTTTGTAAGCGTGATCAGATTGAAGTTGATTTGAAAAGAAAAATTCTGGATGACCTACGTCACCT GGAAAGTGTTGTCACCAATAAGATTGCGGAAATTGAAGCTGATTTAGAAAAGCTCACCAATGGCCGCTAA
Upstream 100 bases:
>100_bases CCCGCTATTTTTTTGCCTTACGCCTTGCATACCAAAGTCATTGGCGACATTTTCCGCCATAATAGAAAACTGTGGAATAT AAAATCAAAAAGGTGGCGTT
Downstream 100 bases:
>100_bases ATCAGGGGTGGCATGATAACCTCGGTAACCGAATACGTATTGTGACAACGAAACTTGCCACAATACGCAATAAAATCAAG ATATAAAGATTACTGAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MYDNLKSLGITQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVSDNASHGYKEINEINPNLRYVI DELDQLCKRDQIEVDLKRKILDDLRHLESVVTNKIAEIEADLEKLTNGR
Sequences:
>Translated_129_residues MYDNLKSLGITQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVSDNASHGYKEINEINPNLRYVI DELDQLCKRDQIEVDLKRKILDDLRHLESVVTNKIAEIEADLEKLTNGR >Mature_129_residues MYDNLKSLGITQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVSDNASHGYKEINEINPNLRYVI DELDQLCKRDQIEVDLKRKILDDLRHLESVVTNKIAEIEADLEKLTNGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0325 family
Homologues:
Organism=Escherichia coli, GI1786359, Length=126, Percent_Identity=85.7142857142857, Blast_Score=226, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1009_YERP3 (A7FFG5)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001399993.1 - STRING: A7FFG5 - GeneID: 5385196 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_1009 - eggNOG: NOG05865 - HOGENOM: HBG298613 - OMA: NLRYVIE - ProtClustDB: PRK13677 - BioCyc: YPSE349747:YPSIP31758_1009-MONOMER - HAMAP: MF_01519 - InterPro: IPR020911
Pfam domain/function: PF11944 DUF3461
EC number: NA
Molecular weight: Translated: 15232; Mature: 15232
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDNLKSLGITQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVSD CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCHHHCC NASHGYKEINEINPNLRYVIDELDQLCKRDQIEVDLKRKILDDLRHLESVVTNKIAEIEA CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKLTNGR HHHHHCCCC >Mature Secondary Structure MYDNLKSLGITQPEDVDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPRQRKTVVSD CCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCHHHCC NASHGYKEINEINPNLRYVIDELDQLCKRDQIEVDLKRKILDDLRHLESVVTNKIAEIEA CCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DLEKLTNGR HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA