Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928141
Identifier: 218928141
GI number: 218928141
Start: 1071907
End: 1072287
Strand: Reverse
Name: 218928141
Synonym: YPO0968a
Alternate gene names: NA
Gene position: 1072287-1071907 (Counterclockwise)
Preceding gene: 218928142
Following gene: 218928140
Centisome position: 23.04
GC content: 36.48
Gene sequence:
>381_bases ATGGAAAGTCAACAAAAAAATGATTGTTTAATTATGAGGGCTGAGCATGTAAATGCATCCGATTACCTTAAGCTATGCAG AAATTCCTCAAGTGAGGAAAGTGAGGAAAGTGATTATTTCACAATGAATGATCGCGGAGAATGGGAGGCAGTAACTGATG GCATCCCAGTTTTGGCAGATATAAATGTCACGTCGAAATTTACCGGGATGAGTGCAGTAATTTCGTGCAAGTATGAAGAT GATGCTGGATACCATTCTGAACAGTGTTTTCAGGCAGAAATAAATTTACCAAAAAAGATAAATTTCATTTTTACTGGTAG AGGCGATCCGTCCTTATTTAATTATTACAAGAGCATATATCTTTCATTCAAGGTAAGATGA
Upstream 100 bases:
>100_bases TTATGATGTTTTTTTTGATTTTGTTTGCGAATTCATGTTATAGCGGGGAAGAGCATAAATCAACCCCTCTGGGAGAGGCT GCTATAAATATTCCTGTAAA
Downstream 100 bases:
>100_bases TGCATATACCCTGAGGGGATTTCACGAAAAATTAATCTAAAGCGAAAATACTTCCGAATTATAATCGTGATTTTGTGCTT GAACCCCTGAATAAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MESQQKNDCLIMRAEHVNASDYLKLCRNSSSEESEESDYFTMNDRGEWEAVTDGIPVLADINVTSKFTGMSAVISCKYED DAGYHSEQCFQAEINLPKKINFIFTGRGDPSLFNYYKSIYLSFKVR
Sequences:
>Translated_126_residues MESQQKNDCLIMRAEHVNASDYLKLCRNSSSEESEESDYFTMNDRGEWEAVTDGIPVLADINVTSKFTGMSAVISCKYED DAGYHSEQCFQAEINLPKKINFIFTGRGDPSLFNYYKSIYLSFKVR >Mature_126_residues MESQQKNDCLIMRAEHVNASDYLKLCRNSSSEESEESDYFTMNDRGEWEAVTDGIPVLADINVTSKFTGMSAVISCKYED DAGYHSEQCFQAEINLPKKINFIFTGRGDPSLFNYYKSIYLSFKVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14424; Mature: 14424
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQQKNDCLIMRAEHVNASDYLKLCRNSSSEESEESDYFTMNDRGEWEAVTDGIPVLAD CCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEEE INVTSKFTGMSAVISCKYEDDAGYHSEQCFQAEINLPKKINFIFTGRGDPSLFNYYKSIY CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHEEE LSFKVR EEEEEC >Mature Secondary Structure MESQQKNDCLIMRAEHVNASDYLKLCRNSSSEESEESDYFTMNDRGEWEAVTDGIPVLAD CCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEEE INVTSKFTGMSAVISCKYEDDAGYHSEQCFQAEINLPKKINFIFTGRGDPSLFNYYKSIY CCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHEEE LSFKVR EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA