| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is gshB
Identifier: 218928107
GI number: 218928107
Start: 1027196
End: 1028155
Strand: Direct
Name: gshB
Synonym: YPO0935
Alternate gene names: 218928107
Gene position: 1027196-1028155 (Clockwise)
Preceding gene: 218928106
Following gene: 218928108
Centisome position: 22.07
GC content: 49.17
Gene sequence:
>960_bases ATGATTAAGCTCGGTATCGTAATGGACCCTATTTCGTCCATTAACATCAAGAAAGACACCAGTTTCGCTATGCTATTAGA AGCGCAGCGCCGTGGCTGGGAATTGCATTACATGGAGATGGGGGATCTCTATATGCGTGGGGGTGATGGCCGCGCACGTA CCCGCCGACTGAATGTGAAGCAGGATAAAGATAACTGGTTCAGTTTTGGGGCTGAGCAGGACCTGCCGCTCTATGATCTT GATGTCATTCTGATGCGTAAAGATCCGCCGTTTGATACCGAGTTTATCTATGCCACCTATATTCTGGAACGTGCAGAAGA CAAAGGCACACTGGTGGTGAATAAGCCGCAAAGCCTACGCGATTGTAACGAAAAACTGTTTACGGCTTGGTTCCCAGAGT TAACCCCAGATACGCTGGTCAGCCGCAGTAAAGACCATATCCGCAAATTCCACCAGGAACACGGCGATATCATCCTGAAA CCACTGGATGGCATGGGGGGTACCTCAATATTCAGAGTAAAACAAGATGACCCTAACCTCTCGGTTATCATTGAAACACT GACCGAATTAAGCAGCCGCTTCTGCATGGCACAAAACTTCTTACCGGCCATTAAAGAAGGCGATAAACGTGTGCTAGTGG TTGATGGCGAGCCTGTGCCTTATTGTCTGGCACGTATTCCCGCCCAAGGTGAAACCCGTGGCAATCTGGCTGCCGGTGGC CGTGGCGAAGCCCGCCCATTGAGTGAAAGTGATTGGGAAATTGCCCGCACTGTTGCACCAATACTGAAGCAAAAAGGCTT AATTTTTGTTGGGTTGGATATTATTGGTGATCGCTTGACTGAAATTAACGTCACCAGCCCGACCTGCGTGCGTGAAATCG AAGCGGCCTTCCCCGAGATTTCCATTACCGGTATGTTAATGGACGCCATTGAAAGACGTTTGGCTGACAAAAAGGCCTAA
Upstream 100 bases:
>100_bases CGAGTGCTGCGAACAGAAACTACCGCCCTTACCGCAATTACTGCGTTGCAGGTGCGGTTTGGCGATCTGGGATAACCCCA TTTCCCACTAGGAGAAAAGA
Downstream 100 bases:
>100_bases TACATAAAACGGGGTGTGGTGTTTTTCTAAGCGCTGCCCCCGTGACTTTATCCTCATTTATCCGCATACTGGCACCCGTT CATCCATTAACTCAGCGACT
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIKLGIVMDPISSINIKKDTSFAMLLEAQRRGWELHYMEMGDLYMRGGDGRARTRRLNVKQDKDNWFSFGAEQDLPLYDL DVILMRKDPPFDTEFIYATYILERAEDKGTLVVNKPQSLRDCNEKLFTAWFPELTPDTLVSRSKDHIRKFHQEHGDIILK PLDGMGGTSIFRVKQDDPNLSVIIETLTELSSRFCMAQNFLPAIKEGDKRVLVVDGEPVPYCLARIPAQGETRGNLAAGG RGEARPLSESDWEIARTVAPILKQKGLIFVGLDIIGDRLTEINVTSPTCVREIEAAFPEISITGMLMDAIERRLADKKA
Sequences:
>Translated_319_residues MIKLGIVMDPISSINIKKDTSFAMLLEAQRRGWELHYMEMGDLYMRGGDGRARTRRLNVKQDKDNWFSFGAEQDLPLYDL DVILMRKDPPFDTEFIYATYILERAEDKGTLVVNKPQSLRDCNEKLFTAWFPELTPDTLVSRSKDHIRKFHQEHGDIILK PLDGMGGTSIFRVKQDDPNLSVIIETLTELSSRFCMAQNFLPAIKEGDKRVLVVDGEPVPYCLARIPAQGETRGNLAAGG RGEARPLSESDWEIARTVAPILKQKGLIFVGLDIIGDRLTEINVTSPTCVREIEAAFPEISITGMLMDAIERRLADKKA >Mature_319_residues MIKLGIVMDPISSINIKKDTSFAMLLEAQRRGWELHYMEMGDLYMRGGDGRARTRRLNVKQDKDNWFSFGAEQDLPLYDL DVILMRKDPPFDTEFIYATYILERAEDKGTLVVNKPQSLRDCNEKLFTAWFPELTPDTLVSRSKDHIRKFHQEHGDIILK PLDGMGGTSIFRVKQDDPNLSVIIETLTELSSRFCMAQNFLPAIKEGDKRVLVVDGEPVPYCLARIPAQGETRGNLAAGG RGEARPLSESDWEIARTVAPILKQKGLIFVGLDIIGDRLTEINVTSPTCVREIEAAFPEISITGMLMDAIERRLADKKA
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain
Homologues:
Organism=Escherichia coli, GI1789316, Length=317, Percent_Identity=80.1261829652997, Blast_Score=531, Evalue=1e-152,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GSHB_YERPE (P58582)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AG0114 - RefSeq: NP_670620.1 - RefSeq: NP_994784.1 - RefSeq: YP_002345982.1 - ProteinModelPortal: P58582 - SMR: P58582 - IntAct: P58582 - GeneID: 1148268 - GeneID: 1173771 - GeneID: 2764424 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO0935 - KEGG: ypk:y3321 - KEGG: ypm:YP_3507 - HOGENOM: HBG624526 - OMA: WMRKDPP - ProtClustDB: PRK05246 - BioCyc: YPES187410:Y3321-MONOMER - BioCyc: YPES214092:YPO0935-MONOMER - BRENDA: 6.3.2.3 - HAMAP: MF_00162 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 - Gene3D: G3DSA:3.30.1490.20 - Gene3D: G3DSA:3.30.470.20 - Gene3D: G3DSA:3.40.50.20 - TIGRFAMs: TIGR01380
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N; SSF52440 PreATP-grasp-like
EC number: =6.3.2.3
Molecular weight: Translated: 36016; Mature: 36016
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLGIVMDPISSINIKKDTSFAMLLEAQRRGWELHYMEMGDLYMRGGDGRARTRRLNVK CEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCEEEECCCCCCEEEEECCC QDKDNWFSFGAEQDLPLYDLDVILMRKDPPFDTEFIYATYILERAEDKGTLVVNKPQSLR CCCCCCEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHH DCNEKLFTAWFPELTPDTLVSRSKDHIRKFHQEHGDIILKPLDGMGGTSIFRVKQDDPNL HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCH SVIIETLTELSSRFCMAQNFLPAIKEGDKRVLVVDGEPVPYCLARIPAQGETRGNLAAGG HHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC RGEARPLSESDWEIARTVAPILKQKGLIFVGLDIIGDRLTEINVTSPTCVREIEAAFPEI CCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCCEEEECCCCHHHHHHHHHCCCE SITGMLMDAIERRLADKKA EEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKLGIVMDPISSINIKKDTSFAMLLEAQRRGWELHYMEMGDLYMRGGDGRARTRRLNVK CEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCEEEECCCCCCEEEEECCC QDKDNWFSFGAEQDLPLYDLDVILMRKDPPFDTEFIYATYILERAEDKGTLVVNKPQSLR CCCCCCEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHH DCNEKLFTAWFPELTPDTLVSRSKDHIRKFHQEHGDIILKPLDGMGGTSIFRVKQDDPNL HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCH SVIIETLTELSSRFCMAQNFLPAIKEGDKRVLVVDGEPVPYCLARIPAQGETRGNLAAGG HHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC RGEARPLSESDWEIARTVAPILKQKGLIFVGLDIIGDRLTEINVTSPTCVREIEAAFPEI CCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEHHHHCCCCEEEECCCCHHHHHHHHHCCCE SITGMLMDAIERRLADKKA EEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430