Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is pepP [H]
Identifier: 218928083
GI number: 218928083
Start: 999292
End: 1000605
Strand: Reverse
Name: pepP [H]
Synonym: YPO0910
Alternate gene names: 218928083
Gene position: 1000605-999292 (Counterclockwise)
Preceding gene: 218928084
Following gene: 218928082
Centisome position: 21.5
GC content: 51.45
Gene sequence:
>1314_bases ATGACTCAGCAAGAATACCAGAACCGCCGTCAGGCACTGTTGGCGAAAATGGCCCCTGGCAGTGCTGCTATTATTTTTGC CGCACCAGAAGCCACACGCAGTGCAGATTCTGAATATCCTTATCGGCAGAATAGTGATTTTAGCTATCTGACGGGCTTCA ACGAGCCAGAAGCGGTGTTGATTCTGGTTAAAAGCGATGAGACTCATAACCACAGCGTGCTGTTTAACCGGATCCGGGAT TTAACCGCTGAGATCTGGTTTGGTCGTCGGTTAGGGCAAGAGGCCGCCCCCACGAAACTGGCAGTAGATCGCGCATTACC TTTCGATGAAATCAACGAGCAGCTCTATTTGCTGCTTAATCGCCTGGATGTGATTTATCACGCTCAAGGGCAATATGCTT ACGCAGATAATATTGTTTTTGCTGCACTGGAAAAATTACGTCATGGTTTTCGTAAAAATCTCCGAGCGCCAGCCACGTTA ACCGATTGGCGGCCTTGGTTGCATGAAATGCGTCTGTTTAAATCAGCCGAAGAGATCGCCGTGCTGCGCCGCGCAGGTGA AATCAGCGCACTGGCCCATACCCGTGCGATGGAAAAATGCCGCCCCGGTATGTTTGAATATCAATTGGAAGGGGAAATTC TGCATGAATTTACCCGCCATGGCGCGCGTTATCCAGCGTACAACACCATCGTTGGTGGGGGTGAAAACGGCTGCATTTTG CACTATACCGAGAATGAGTGTGAGCTGCGGGACGGGGATTTGGTCCTTATCGACGCGGGTTGTGAATACCGTGGCTATGC CGGTGATATCACTCGCACTTTCCCGGTAAATGGCAAATTTACCCCCGCTCAGCGGGCGGTTTATGACATCGTTCTGGCGG CTATCAATAAATCGCTGACGTTGTTCCGCCCCGGTACCAGCATCCGTGAGGTCACGGAAGAAGTGGTGCGGATCATGGTC GTCGGTTTGGTGGAGTTGGGTATTCTGAAAGGTGATATCGAACAGTTGATCGCTGAACAAGCCCATCGGCCATTCTTTAT GCATGGCCTAAGCCACTGGCTGGGGATGGATGTCCATGACGTCGGCGATTACGGTAGCAGTGACCGTGGCCGTATCCTTG AACCGGGCATGGTATTAACCGTGGAACCGGGCTTGTACATTGCCCCAGATGCCGATGTCCCGCCGCAATACCGGGGCATT GGTATTCGTATTGAAGATGACATTGTGATTACCGCCACGGGTAACGAAAACTTGACCGCGAGCGTGGTTAAAGACCCTGA TGACATTGAAGCATTGATGGCATTGAATCACTGA
Upstream 100 bases:
>100_bases GACACTGCATTGATTTTGAACAATGGGCTGATTTTATCAATTGGCAAGTGTGGTGAAGTGAGTTTCAGGTGATGCAAACC GGATATTTCAGGAGAAGGTC
Downstream 100 bases:
>100_bases TGGTATTGAATCATTGATGGCATTGAAGCATTGATGGTATTGAAACACAGATGGCAGCGAGATAACTGATGAGTGTGATA ATTGTTGGTGGTGGAATGGC
Product: proline aminopeptidase P II
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRD LTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATL TDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMV VGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGI GIRIEDDIVITATGNENLTASVVKDPDDIEALMALNH
Sequences:
>Translated_437_residues MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRD LTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATL TDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMV VGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGI GIRIEDDIVITATGNENLTASVVKDPDDIEALMALNH >Mature_436_residues TQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRDL TAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLT DWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILH YTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMVV GLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIG IRIEDDIVITATGNENLTASVVKDPDDIEALMALNH
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=448, Percent_Identity=32.8125, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI149589008, Length=450, Percent_Identity=32.6666666666667, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI260593665, Length=308, Percent_Identity=37.6623376623377, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI260593663, Length=342, Percent_Identity=33.0409356725146, Blast_Score=161, Evalue=1e-39, Organism=Escherichia coli, GI1789275, Length=433, Percent_Identity=81.986143187067, Blast_Score=747, Evalue=0.0, Organism=Escherichia coli, GI1790282, Length=292, Percent_Identity=31.8493150684932, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788728, Length=255, Percent_Identity=30.1960784313725, Blast_Score=108, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17508215, Length=470, Percent_Identity=31.7021276595745, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71989583, Length=373, Percent_Identity=28.1501340482574, Blast_Score=140, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6320922, Length=441, Percent_Identity=32.1995464852608, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321118, Length=451, Percent_Identity=29.2682926829268, Blast_Score=172, Evalue=1e-43, Organism=Drosophila melanogaster, GI19920384, Length=416, Percent_Identity=37.2596153846154, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI21357079, Length=452, Percent_Identity=34.7345132743363, Blast_Score=206, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 49072; Mature: 48941
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVL CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE ILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHHHHHH RLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIA HHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCEEECCCCCEEE HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLT EEECCCCEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEE LFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHD EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH VGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTA CCCCCCCCCCCEECCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCEEE SVVKDPDDIEALMALNH EEECCCHHHHHHHHCCC >Mature Secondary Structure TQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVL CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEE ILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLN EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHHHHHH RLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIA HHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCIL HHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCCCCCEEECCCCCEEE HYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLT EEECCCCEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEE LFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHD EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHH VGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTA CCCCCCCCCCCEECCCEEEEECCCEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCEEE SVVKDPDDIEALMALNH EEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]