Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218928059
Identifier: 218928059
GI number: 218928059
Start: 968972
End: 969232
Strand: Reverse
Name: 218928059
Synonym: YPO0884
Alternate gene names: NA
Gene position: 969232-968972 (Counterclockwise)
Preceding gene: 218928060
Following gene: 218928058
Centisome position: 20.83
GC content: 39.46
Gene sequence:
>261_bases ATGGTCAAGGTTGACTGGTCGAGGAAAGCAGTTAAGCAGTTACTTTCAATAGATGCCAGATATCGTAAACCTATCAGTGA AAAAGTGAATAAACTGACAAATTTCCCTGCTGTTGATTTGGATATCAAAAAGTTACAGATGGGTGATAGCCAATTTCGTA TGCGTGTAGGGAATTACAGGGTTATCTTTCAGATTGTAGAGGGAACACCTGTGATATGTACAATCCAGGAAGTTAAACGT AGAACCACGGCAACCTATTAG
Upstream 100 bases:
>100_bases GATTAGTTAATAATAAGGTGTTTGTGTTGACCTTGCTTACATATAACTCTACTCTCTCACCATAACAGCGGATGTGATCA CTTACAAAAGTGAGGAAACG
Downstream 100 bases:
>100_bases GTTAGCTCAGTATATTTTCCCTCAAAGGCATGGTGTTATTTTTCTAAACTAAGGTGAATAAGATGGCAAAACTACAATAC ATTCATGATGAAGCAGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Protein; Xin-Antitoxin System Toxin Component RelE Family; Conserved Protein Phage-Related
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYRVIFQIVEGTPVICTIQEVKR RTTATY
Sequences:
>Translated_86_residues MVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYRVIFQIVEGTPVICTIQEVKR RTTATY >Mature_86_residues MVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYRVIFQIVEGTPVICTIQEVKR RTTATY
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10032; Mature: 10032
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYR CEECCCHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCHHHHHCCCHHHEEEECCEE VIFQIVEGTPVICTIQEVKRRTTATY EEEEEECCCCEEEEHHHHHHHHCCCC >Mature Secondary Structure MVKVDWSRKAVKQLLSIDARYRKPISEKVNKLTNFPAVDLDIKKLQMGDSQFRMRVGNYR CEECCCHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCHHHHHCCCHHHEEEECCEE VIFQIVEGTPVICTIQEVKRRTTATY EEEEEECCCCEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA