| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928037
Identifier: 218928037
GI number: 218928037
Start: 949858
End: 950376
Strand: Direct
Name: 218928037
Synonym: YPO0862
Alternate gene names: NA
Gene position: 949858-950376 (Clockwise)
Preceding gene: 218928036
Following gene: 218928038
Centisome position: 20.41
GC content: 31.41
Gene sequence:
>519_bases ATGAAAAATAAAATATTCACAGCAATAGTGCTATTATTTTCCTTTAGCCTTTCAATTCAAGCCATTGCCAATAAAAAAAA CGATAAAAAAATCATCATTAATAACCTAACACTATCCTCAACATGGGTGCGAACGGCCATATCAGAGTCTATAGACAGCC CGAGCAATACGATAAATAAAGACGATATCAAGAGGATGGCAGCAGGAAAGCACATATACATAATGGATAATAAAATAACG ATAGAGGGAGTCTGTACCTTTAAGTATGTTATTAAAAAAAGCAGTCCTTTAAATTATTGGCATAGTGATAAAACCGTTAA TTTATATAAAGAAGAGTTTCTAAAAAACGGTTTTAAGTTAAGCGAAAATTTAGCTTTTATTTCAGCTGAAGATCCGAGTA ATGATTGCGACTCCCCTTACTCTCAAATCGCCATAACTGATAATGTGATATTTACTGTTTATAATGGTCATATTGTATTT TACACAAATTCAAACAATGTTAATGAATTGGCATTATGA
Upstream 100 bases:
>100_bases GTTCGTTTACCTACGTACCGGGCATTTTGGACTTGATGCATCCGTTAGATAAAGTCTGCACAGAAAAATTGGGCCATAAT GGTCGGGAAAGTAATGACGA
Downstream 100 bases:
>100_bases ACAGTATTTGAAATATTCTCGATTGCTTCTATACCCCAAATAACTCAAGTTACAGAAAGGCAGCAAGCGAGAGACAAATC GGTTAGGCGCAGATTTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKNKIFTAIVLLFSFSLSIQAIANKKNDKKIIINNLTLSSTWVRTAISESIDSPSNTINKDDIKRMAAGKHIYIMDNKIT IEGVCTFKYVIKKSSPLNYWHSDKTVNLYKEEFLKNGFKLSENLAFISAEDPSNDCDSPYSQIAITDNVIFTVYNGHIVF YTNSNNVNELAL
Sequences:
>Translated_172_residues MKNKIFTAIVLLFSFSLSIQAIANKKNDKKIIINNLTLSSTWVRTAISESIDSPSNTINKDDIKRMAAGKHIYIMDNKIT IEGVCTFKYVIKKSSPLNYWHSDKTVNLYKEEFLKNGFKLSENLAFISAEDPSNDCDSPYSQIAITDNVIFTVYNGHIVF YTNSNNVNELAL >Mature_172_residues MKNKIFTAIVLLFSFSLSIQAIANKKNDKKIIINNLTLSSTWVRTAISESIDSPSNTINKDDIKRMAAGKHIYIMDNKIT IEGVCTFKYVIKKSSPLNYWHSDKTVNLYKEEFLKNGFKLSENLAFISAEDPSNDCDSPYSQIAITDNVIFTVYNGHIVF YTNSNNVNELAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19472; Mature: 19472
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKIFTAIVLLFSFSLSIQAIANKKNDKKIIINNLTLSSTWVRTAISESIDSPSNTINK CCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCH DDIKRMAAGKHIYIMDNKITIEGVCTFKYVIKKSSPLNYWHSDKTVNLYKEEFLKNGFKL HHHHHHHCCCEEEEECCEEEEEEEEEEEEEEECCCCCCEECCCCEEHHHHHHHHHCCCEE SENLAFISAEDPSNDCDSPYSQIAITDNVIFTVYNGHIVFYTNSNNVNELAL CCCEEEEECCCCCCCCCCCCCEEEEECCEEEEEECCEEEEEECCCCCCCCCC >Mature Secondary Structure MKNKIFTAIVLLFSFSLSIQAIANKKNDKKIIINNLTLSSTWVRTAISESIDSPSNTINK CCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHCCCCCCCCCH DDIKRMAAGKHIYIMDNKITIEGVCTFKYVIKKSSPLNYWHSDKTVNLYKEEFLKNGFKL HHHHHHHCCCEEEEECCEEEEEEEEEEEEEEECCCCCCEECCCCEEHHHHHHHHHCCCEE SENLAFISAEDPSNDCDSPYSQIAITDNVIFTVYNGHIVFYTNSNNVNELAL CCCEEEEECCCCCCCCCCCCCEEEEECCEEEEEECCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA