| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is exuT [H]
Identifier: 218928023
GI number: 218928023
Start: 928602
End: 929909
Strand: Direct
Name: exuT [H]
Synonym: YPO0847
Alternate gene names: 218928023
Gene position: 928602-929909 (Clockwise)
Preceding gene: 218928021
Following gene: 218928024
Centisome position: 19.95
GC content: 49.54
Gene sequence:
>1308_bases ATGAGTATTGATATTAATCAATCAGCTAAAATTGTAGGACGGCGGAAAATAAAGTCATTACGTTGGTGGATGCTGGCCTT ATTTTTACTTGGGGTCACCGTTAACTATATAACCCGTAATTCTCTAGGGATTTTAGCCCCTGAGTTAAAAACCAGTCTGA ATATGACTACCGAGCAATACTCATGGATTGTAGCCTCTTTCCAACTGGCTTATACCGTGTTCCAACCACTTTGTGGCTGG TTGATCGATGTCATCGGTTTAAAAATGGGGTTCCTGGTTTGCGCCAGTGTCTGGGCGGTGGTGTGCATGATGCATGCCGG AGCGGGTACCTGGTTCCAACTGGCAGTATTACGCTTCTTTATGGGCAGTGCCGAAGCCGCAGCCACCCCCGCAAACGCCA AAGCCATTTCGGATTGGTTCCCGAAAAAAGAACGGCCCATTGCCGCTGGATGGGCAGGGGTGGGGTTCTCTATCGGTGCG ATGTTGGCCCCCCCGATTATCGTACTGGCGCATGTGGCACTCGGTTGGCAAGGGGCATTCTTGTTCTCCGGCGCATTAGC CATGATTTGGGTTCTGCTGTGGTGGCGTTTTTACCATTCACCGGATACTCATCCAAATCTGAGTCAAGAAGAGTTTGAAC TGATTCACCAAGATAATGAACCCGTACTACCACGACTGCCATTCCTTAAATCCTTAGCCATTCTAAGTAAAAATAAGAAA TTTTACGGTATTGCTATTCCCGCGTTTCTGGCGGAACCGGCCTGGGCTGTATTTAGTTTCTGGGTACCGCTGTATTTAGC CACCGAACGCGGCATGGACCTGAAACAGATCGCCATGTTCGCCTGGCTGCCATTCCTGGCGGCAGATATTGGCAGTGTCG CCAGTGGCTATTTAACCAAACTCTATCAGAAATGGTTTGGTTGCAGCCGGGTCAACTCGGTGGTTGCCAGTTCGGTAACC GGTGCTTTTATGATGGTGTCATTGGCCTTTGTTGCCGTCACCAAAGACCCTTATCTGGCAATCGCTTTAATCTCCATTGG CGGCTTTGGGCACCAAGTCATCTCCTGCATGCTCAGTGCATTAGTGGTTGACTCTTTTGATAAAAATCAGGTTGCCACCG TCAATGGCCTGCGTGGTTCTTCCGCCTGGATCGCCAGCTTCCTGTTTACATTATTAATCGGGGCCGTTTCAGACACTATC GGCTTTAACCCGCTGTTTATCGCTATGGGGTTCTTCGATCTGATTGGGGCCGTATTCCTGATTGCTCTGTTCGCTGAGCG CCGTAATAAACCCCAACCGACGGTCTGA
Upstream 100 bases:
>100_bases ACATTATAACGCAGCGTAATCTTAATAACTGAAGATGGAACATACCAAAATAACAAGTTGGTCCAATTCATTTTATATGG ACTAACACAAGGGGACTGGG
Downstream 100 bases:
>100_bases TGTTGTTAGACCAACTGATGTTGTTAACCAACGGATGTGATTAACCAAACTAATGTTGTTACCAAACTGATCTGATTAAG CCATCCATCAGATGCGATTA
Product: putative sugar transporter
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSIDINQSAKIVGRRKIKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWIVASFQLAYTVFQPLCGW LIDVIGLKMGFLVCASVWAVVCMMHAGAGTWFQLAVLRFFMGSAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGA MLAPPIIVLAHVALGWQGAFLFSGALAMIWVLLWWRFYHSPDTHPNLSQEEFELIHQDNEPVLPRLPFLKSLAILSKNKK FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKQIAMFAWLPFLAADIGSVASGYLTKLYQKWFGCSRVNSVVASSVT GAFMMVSLAFVAVTKDPYLAIALISIGGFGHQVISCMLSALVVDSFDKNQVATVNGLRGSSAWIASFLFTLLIGAVSDTI GFNPLFIAMGFFDLIGAVFLIALFAERRNKPQPTV
Sequences:
>Translated_435_residues MSIDINQSAKIVGRRKIKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWIVASFQLAYTVFQPLCGW LIDVIGLKMGFLVCASVWAVVCMMHAGAGTWFQLAVLRFFMGSAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGA MLAPPIIVLAHVALGWQGAFLFSGALAMIWVLLWWRFYHSPDTHPNLSQEEFELIHQDNEPVLPRLPFLKSLAILSKNKK FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKQIAMFAWLPFLAADIGSVASGYLTKLYQKWFGCSRVNSVVASSVT GAFMMVSLAFVAVTKDPYLAIALISIGGFGHQVISCMLSALVVDSFDKNQVATVNGLRGSSAWIASFLFTLLIGAVSDTI GFNPLFIAMGFFDLIGAVFLIALFAERRNKPQPTV >Mature_434_residues SIDINQSAKIVGRRKIKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQYSWIVASFQLAYTVFQPLCGWL IDVIGLKMGFLVCASVWAVVCMMHAGAGTWFQLAVLRFFMGSAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGAM LAPPIIVLAHVALGWQGAFLFSGALAMIWVLLWWRFYHSPDTHPNLSQEEFELIHQDNEPVLPRLPFLKSLAILSKNKKF YGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKQIAMFAWLPFLAADIGSVASGYLTKLYQKWFGCSRVNSVVASSVTG AFMMVSLAFVAVTKDPYLAIALISIGGFGHQVISCMLSALVVDSFDKNQVATVNGLRGSSAWIASFLFTLLIGAVSDTIG FNPLFIAMGFFDLIGAVFLIALFAERRNKPQPTV
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=326, Percent_Identity=25.4601226993865, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI2367193, Length=430, Percent_Identity=46.2790697674419, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI87082320, Length=438, Percent_Identity=24.4292237442922, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1789152, Length=449, Percent_Identity=23.3853006681514, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1789515, Length=418, Percent_Identity=25.1196172248804, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI2367379, Length=420, Percent_Identity=23.5714285714286, Blast_Score=119, Evalue=5e-28, Organism=Drosophila melanogaster, GI28573708, Length=359, Percent_Identity=24.7910863509749, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28573707, Length=359, Percent_Identity=24.7910863509749, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28573299, Length=289, Percent_Identity=24.2214532871972, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24658666, Length=304, Percent_Identity=24.0131578947368, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24584153, Length=397, Percent_Identity=23.1738035264484, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24658658, Length=462, Percent_Identity=20.7792207792208, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45550495, Length=447, Percent_Identity=23.489932885906, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI20130135, Length=320, Percent_Identity=24.0625, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI45550364, Length=306, Percent_Identity=25.1633986928105, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24639764, Length=348, Percent_Identity=22.7011494252874, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45550460, Length=318, Percent_Identity=23.2704402515723, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47808; Mature: 47677
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDINQSAKIVGRRKIKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH SWIVASFQLAYTVFQPLCGWLIDVIGLKMGFLVCASVWAVVCMMHAGAGTWFQLAVLRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MGSAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGAMLAPPIIVLAHVALGWQGAF HCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH LFSGALAMIWVLLWWRFYHSPDTHPNLSQEEFELIHQDNEPVLPRLPFLKSLAILSKNKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKQIAMFAWLPFLAADIGSVASGYLTK EEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LYQKWFGCSRVNSVVASSVTGAFMMVSLAFVAVTKDPYLAIALISIGGFGHQVISCMLSA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHH LVVDSFDKNQVATVNGLRGSSAWIASFLFTLLIGAVSDTIGFNPLFIAMGFFDLIGAVFL HHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IALFAERRNKPQPTV HHHHHHHCCCCCCCC >Mature Secondary Structure SIDINQSAKIVGRRKIKSLRWWMLALFLLGVTVNYITRNSLGILAPELKTSLNMTTEQY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH SWIVASFQLAYTVFQPLCGWLIDVIGLKMGFLVCASVWAVVCMMHAGAGTWFQLAVLRFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH MGSAEAAATPANAKAISDWFPKKERPIAAGWAGVGFSIGAMLAPPIIVLAHVALGWQGAF HCCCHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH LFSGALAMIWVLLWWRFYHSPDTHPNLSQEEFELIHQDNEPVLPRLPFLKSLAILSKNKK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC FYGIAIPAFLAEPAWAVFSFWVPLYLATERGMDLKQIAMFAWLPFLAADIGSVASGYLTK EEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LYQKWFGCSRVNSVVASSVTGAFMMVSLAFVAVTKDPYLAIALISIGGFGHQVISCMLSA HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHH LVVDSFDKNQVATVNGLRGSSAWIASFLFTLLIGAVSDTIGFNPLFIAMGFFDLIGAVFL HHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IALFAERRNKPQPTV HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]