Definition | Yersinia pestis CO92 chromosome, complete genome. |
---|---|
Accession | NC_003143 |
Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218927981
Identifier: 218927981
GI number: 218927981
Start: 881326
End: 881961
Strand: Direct
Name: 218927981
Synonym: YPO0801
Alternate gene names: NA
Gene position: 881326-881961 (Clockwise)
Preceding gene: 218927980
Following gene: 218927985
Centisome position: 18.94
GC content: 47.96
Gene sequence:
>636_bases ATGCCCGGTACAACATTGCACTATATTTTCGACCCGCTATGTGGATGGTGCTATGGCGCGGCCCCCTTGGTACAAACAGC CCAAAACATTCCAGGCTTGACGCTGGTATTGCACGGAGGTGGCATGATGTCTGGTGCAAACCGCCGCCAAATTGATACCC AATGGCGCAGCTATGTCATGCCTCATGATAAACGTATTGCAGAATTGACCGGACAGACTTTTGGCGACAATTATTTCAAC CAATTACTGAATGATACTTCGGCAATAATGGATTCTACGCCCCCTATTGCCGCCATTTTAGCAGCAGAAGCACTGGCGGG TGATGGAGCAAAAATGCTACATCGTATCCAACTAGCACATTATGTTGAAGGCCGCCGTATTGCCGATACACCCGTACTAA CCGTGCTCGCCGCAGATATTGGCCTGAATACAGAGGCTTTTATCAATGCTTTTAACATTGCCCAAAAACATGCTGCACAA CATATTGCGGAAAGCCGAACCATGCTAGCAAAAGTGCAAGGGCACGGCTTCCCAACATTTATATTGCAAGATGCTGCAGG CAAGATGACAGTTGTACCTGCAGGCGATTATTTCGGTAATCAACCGGGTTGGATCAACAGGTTAACTAACGCGTGA
Upstream 100 bases:
>100_bases GTAAATGAGGTTATTGACAAAGTGCCCGTAGCGAAGTGAATAGCAGCAAATAAAGACGCCATAAATTGAATGGCTAAAAA GAAGCACAGAGGAACACAGT
Downstream 100 bases:
>100_bases ATCAATAGCAGCAATCGTGCTCTCCTTTGCTAATCGTAGAGGAGAGTATTTTTCTACAGGTAAATGAAAGCGGGCTACCG ACTGATTAAGCTGTAAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; DSBA Oxidoreductase; Thioredoxin; Thioredoxin Domain Protein DsbA Family; Protein-Disulfide Isomerase-Like Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Thioredoxin Domain-Containing Protein DsbA Family
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPGTTLHYIFDPLCGWCYGAAPLVQTAQNIPGLTLVLHGGGMMSGANRRQIDTQWRSYVMPHDKRIAELTGQTFGDNYFN QLLNDTSAIMDSTPPIAAILAAEALAGDGAKMLHRIQLAHYVEGRRIADTPVLTVLAADIGLNTEAFINAFNIAQKHAAQ HIAESRTMLAKVQGHGFPTFILQDAAGKMTVVPAGDYFGNQPGWINRLTNA
Sequences:
>Translated_211_residues MPGTTLHYIFDPLCGWCYGAAPLVQTAQNIPGLTLVLHGGGMMSGANRRQIDTQWRSYVMPHDKRIAELTGQTFGDNYFN QLLNDTSAIMDSTPPIAAILAAEALAGDGAKMLHRIQLAHYVEGRRIADTPVLTVLAADIGLNTEAFINAFNIAQKHAAQ HIAESRTMLAKVQGHGFPTFILQDAAGKMTVVPAGDYFGNQPGWINRLTNA >Mature_210_residues PGTTLHYIFDPLCGWCYGAAPLVQTAQNIPGLTLVLHGGGMMSGANRRQIDTQWRSYVMPHDKRIAELTGQTFGDNYFNQ LLNDTSAIMDSTPPIAAILAAEALAGDGAKMLHRIQLAHYVEGRRIADTPVLTVLAADIGLNTEAFINAFNIAQKHAAQH IAESRTMLAKVQGHGFPTFILQDAAGKMTVVPAGDYFGNQPGWINRLTNA
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22829; Mature: 22698
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTTLHYIFDPLCGWCYGAAPLVQTAQNIPGLTLVLHGGGMMSGANRRQIDTQWRSYVM CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC PHDKRIAELTGQTFGDNYFNQLLNDTSAIMDSTPPIAAILAAEALAGDGAKMLHRIQLAH CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH YVEGRRIADTPVLTVLAADIGLNTEAFINAFNIAQKHAAQHIAESRTMLAKVQGHGFPTF HHCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE ILQDAAGKMTVVPAGDYFGNQPGWINRLTNA EEECCCCCEEEEECCCCCCCCCHHHHHCCCC >Mature Secondary Structure PGTTLHYIFDPLCGWCYGAAPLVQTAQNIPGLTLVLHGGGMMSGANRRQIDTQWRSYVM CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCC PHDKRIAELTGQTFGDNYFNQLLNDTSAIMDSTPPIAAILAAEALAGDGAKMLHRIQLAH CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH YVEGRRIADTPVLTVLAADIGLNTEAFINAFNIAQKHAAQHIAESRTMLAKVQGHGFPTF HHCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE ILQDAAGKMTVVPAGDYFGNQPGWINRLTNA EEECCCCCEEEEECCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA