Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is bisC [C]
Identifier: 218927974
GI number: 218927974
Start: 871777
End: 874038
Strand: Reverse
Name: bisC [C]
Synonym: YPO0794
Alternate gene names: 218927974
Gene position: 874038-871777 (Counterclockwise)
Preceding gene: 218927976
Following gene: 218927973
Centisome position: 18.78
GC content: 51.99
Gene sequence:
>2262_bases ATGTCCATCATCCGTTACCCCCAACTTGCCCATTGGGGCGCTTATACCGCAGTTGTTGAAGATGGCAAGCTGATCCGCTG CGAGCCATTTGCCGATGATCCCGATCCCTCGCCGCTACTGAACTCAATTGTTCCGATGGTTTACTCCGATAAACGTATCC GTAAACCCGCCATCCGCCGTTCTTGGTTAAAGCGGCGGGAGAAGAGTGACCGGACTCTACGCGGGCAGGAGGATTTTGTT GAAGTCGACTGGGATGTGGCGCTGGATTTAGTGGCCGAAGAGAATCGCCGGGTTAGGGACCAATACGGGCCTGCTGGGTT ATTTACCGGCTCTTATGGCTGGTCTTCTGCGGGGCGTTTACATCATGCCCGCTCATTAGTTCGGCGTTTCTATTTCAGTG GCGGTGGCGGTGTCGATCAATTAGGTAATTACAGTTGGGGGGCTGCACAATTTTTCCTGCCTTATGTCATTGGGACCTTT AGCCCATTGACCGGGCGGGTGACGTCATGGCCCAGTGTGGTGGAACACTGTGAATTGTTCATTGCTTTTGGTGGGCTGGC ACTGAAAAATGCGCAAGTCTCCTCCGGTGGGTCGGCTGAACATTCCCTTAAACTCTGGCTAGAGAAACTGGCACAAAAAG GGACGCCAGTCATTAATATCAGCCCGATGCGTGATGATTGCCCCGCATTTGTTAACGCGGAATGGATACCCATTCGTCCG AATACAGACGTCGCGCTGATGTTGGCGTTGGCTTATGAAATTCAGCGCCTTGATGGTCATGATGAGGCATTCCTTGCAAC CCATTGTGTGGGTTATGGTCAATTGGCTGATTATATTCGTGGGGCCAATGACGGGATAGCGAAAACTCCAGACTGGGCGA GCAGCATTACCGGTATTCCTGCGGCCAGAATCGCACAGTTAGCGCAACAACTTATCGGTGTGCGCAGTTTTATGACCTGT TCGTATTCGGTGCAACGTGCGCATCGTGGTGAGCAACCGTATTGGATGGTGATTGCATTATCAGCCATGTTGGGGCAAGT CGGGCTACCGGGTGGGGGTTTTTCATTCGGTCATGGTTCGATGAATGGTGTGGGTAACCCGCGCATTGATACACCGGGGC CAGCCATGCCAGTGGGTAAGAACCCCGCCGGATTGGCTATTCCTGTGGCACGGATTTGCGACATGTTGTTACAACCGGGG CAACCATATCAATTTCAGGGTGAAACACATACCTACCCGGATATTCATTTGGTGCACTGGGCGGGTGGGAACCCGTTCCA TCATCATCAGCAGTTGAATCGGTTGGTTGAGGGGTGGCAAAAACCGGATACCGTGATCGTACAGGACATTTGGTGGACGC CCGTAGCAAAAATGGCCGATATCGTCCTGCCAGTCACCAGTTCACTGGAGCGTAATGATATCGGTGGATCATCCAGGGAT CGCTATGTCTTGGCGATGCATCAGGCGATTGCACCACAGCATCAGGCGCGCCACGATTTTGATATTTTCGCCGACTTGGC TGACCGATTGGGCTACCGTGAAACCTTTACCGAGGGTCGTGATGAAATGGCGTGGATCAGGCATATTTATCAGGAGTGTG GTGCGGCACAGCGCTCTCATGATGTTGAATGGCCAGATTTTGAGACTTTTTGGCAACAAGGGTATGTCGGTTTACCTGCT CCCTCCAAAGCATTTGTGTTCTTTGATTCTTTCCGTGAAGACCCACAGGCTAATCCATTACAGACCCCGAGTGGCAAAAT TGAATTATTTAGTGAAAAAATTGCCAGCTACCAATACAACGATTTTGCACCTCATGCAGAGTGGAAACCTCCGGTCGAAT GGCTGGGCGCTCCGCTGGCTGAACAGTGGCCGCTACATTTAATCTCTATTCAACCGGGAGATCGCTTACACAGTCAGCTC GATCCCGCCCCATTGGCTCAGAGCAATAAAACCGCAGGTCGTGAAACGCTGTATATGCATCCGCTGGATGCGGCCAGCCG TGATATTACCGAAGGTAGTCAGGTCCAGGTTAGCAACTTACGCGGTCACTGTCTGGCGGGGGTCAGTATTACTGATGGGG TTACCCGTGGGGTGGTATTGATGGCAACCGGAGCCTGGTTTGATCCTGGTTTTGGGGGCACGCAGCATAAAATTGAACAA TCCGGTAACCCAAATGTATTGACGCTGGATATTGGGACATCTCGATTGACTCAAGGCCCAAATGCGATGAGCTGTTTGGT CGAGGTGGCGCTTTATGAGTAG
Upstream 100 bases:
>100_bases GTGTATCGCCCCAAATGACTATGTTTAGTCGAAATGGTGCTTTGAGTATGTGCGGTGGCGAATGTTACCTTGATGTTTTA TTTCATTGCCTGAGAGAGCC
Downstream 100 bases:
>100_bases ATTATCTTTCGTTTGCCGCCTTCCTGTAGCTCGAATTATTTAGGGTCTATTCGCCAAACAGCCACTTGGGAATGTATTTC TCTGGTGGCTGAAATGCGAT
Product: putative biotin sulfoxide reductas2
Products: Biotin [C]
Alternate protein names: BDS reductase; BSO reductase [H]
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MSIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRRSWLKRREKSDRTLRGQEDFV EVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRLHHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTF SPLTGRVTSWPSVVEHCELFIAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIPAARIAQLAQQLIGVRSFMTC SYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPG QPYQFQGETHTYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPVAKMADIVLPVTSSLERNDIGGSSRD RYVLAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSHDVEWPDFETFWQQGYVGLPA PSKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYNDFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQL DPAPLAQSNKTAGRETLYMHPLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE
Sequences:
>Translated_753_residues MSIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRRSWLKRREKSDRTLRGQEDFV EVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRLHHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTF SPLTGRVTSWPSVVEHCELFIAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIPAARIAQLAQQLIGVRSFMTC SYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPG QPYQFQGETHTYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPVAKMADIVLPVTSSLERNDIGGSSRD RYVLAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSHDVEWPDFETFWQQGYVGLPA PSKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYNDFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQL DPAPLAQSNKTAGRETLYMHPLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE >Mature_752_residues SIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRRSWLKRREKSDRTLRGQEDFVE VDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRLHHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTFS PLTGRVTSWPSVVEHCELFIAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRPN TDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIPAARIAQLAQQLIGVRSFMTCS YSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGSMNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPGQ PYQFQGETHTYPDIHLVHWAGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPVAKMADIVLPVTSSLERNDIGGSSRDR YVLAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSHDVEWPDFETFWQQGYVGLPAP SKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYNDFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQLD PAPLAQSNKTAGRETLYMHPLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQS GNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE
Specific function: This enzyme may serve as a scavenger, allowing the cell to utilize biotin sulfoxide as a biotin source. It reduces a spontaneous oxidation product of biotin, D-biotin D-sulfoxide (BSO or BDS), back to biotin [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=760, Percent_Identity=38.9473684210526, Blast_Score=548, Evalue=1e-157, Organism=Escherichia coli, GI145693196, Length=763, Percent_Identity=39.4495412844037, Blast_Score=524, Evalue=1e-149, Organism=Escherichia coli, GI1787231, Length=767, Percent_Identity=39.374185136897, Blast_Score=517, Evalue=1e-148, Organism=Escherichia coli, GI87081797, Length=713, Percent_Identity=30.8555399719495, Blast_Score=286, Evalue=4e-78, Organism=Escherichia coli, GI1787870, Length=748, Percent_Identity=28.2085561497326, Blast_Score=250, Evalue=3e-67, Organism=Escherichia coli, GI171474008, Length=746, Percent_Identity=28.1501340482574, Blast_Score=246, Evalue=4e-66, Organism=Escherichia coli, GI3868721, Length=768, Percent_Identity=20.3125, Blast_Score=102, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.7.2.3 [C]
Molecular weight: Translated: 83350; Mature: 83219
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRR CCCCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHCCHHHHH SWLKRREKSDRTLRGQEDFVEVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRL HHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCHH HHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTFSPLTGRVTSWPSVVEHCELF HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCC AARIAQLAQQLIGVRSFMTCSYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPGQPYQFQGETHTYPDIHLVHW CCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEE AGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPVAKMADIVLPVTSSLERNDIGGSSRD CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC RYVLAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSH CEEEEEHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCHHHCC DVEWPDFETFWQQGYVGLPAPSKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYN CCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC DFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQLDPAPLAQSNKTAGRETLYMH CCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEC PLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ CCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHC SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure SIIRYPQLAHWGAYTAVVEDGKLIRCEPFADDPDPSPLLNSIVPMVYSDKRIRKPAIRR CCCCCCCHHHCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHCCHHHHH SWLKRREKSDRTLRGQEDFVEVDWDVALDLVAEENRRVRDQYGPAGLFTGSYGWSSAGRL HHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCHH HHARSLVRRFYFSGGGGVDQLGNYSWGAAQFFLPYVIGTFSPLTGRVTSWPSVVEHCELF HHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH IAFGGLALKNAQVSSGGSAEHSLKLWLEKLAQKGTPVINISPMRDDCPAFVNAEWIPIRP HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC NTDVALMLALAYEIQRLDGHDEAFLATHCVGYGQLADYIRGANDGIAKTPDWASSITGIP CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCC AARIAQLAQQLIGVRSFMTCSYSVQRAHRGEQPYWMVIALSAMLGQVGLPGGGFSFGHGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCC MNGVGNPRIDTPGPAMPVGKNPAGLAIPVARICDMLLQPGQPYQFQGETHTYPDIHLVHW CCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEE AGGNPFHHHQQLNRLVEGWQKPDTVIVQDIWWTPVAKMADIVLPVTSSLERNDIGGSSRD CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC RYVLAMHQAIAPQHQARHDFDIFADLADRLGYRETFTEGRDEMAWIRHIYQECGAAQRSH CEEEEEHHHHCCHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCHHHCC DVEWPDFETFWQQGYVGLPAPSKAFVFFDSFREDPQANPLQTPSGKIELFSEKIASYQYN CCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC DFAPHAEWKPPVEWLGAPLAEQWPLHLISIQPGDRLHSQLDPAPLAQSNKTAGRETLYMH CCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEC PLDAASRDITEGSQVQVSNLRGHCLAGVSITDGVTRGVVLMATGAWFDPGFGGTQHKIEQ CCCCCCCCCCCCCEEEEECCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHC SGNPNVLTLDIGTSRLTQGPNAMSCLVEVALYE CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds) [C]
Specific reaction: Reduces A Spontaneous Oxidation Product Of Biotin, D-Biotin D-Sulfoxide (Bso Or Bds), Back To Biotin. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7733660 [H]