Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218927971
Identifier: 218927971
GI number: 218927971
Start: 867363
End: 867788
Strand: Reverse
Name: 218927971
Synonym: YPO0791
Alternate gene names: NA
Gene position: 867788-867363 (Counterclockwise)
Preceding gene: 218927972
Following gene: 218927968
Centisome position: 18.65
GC content: 40.61
Gene sequence:
>426_bases TTGCTTGTGAAATTTAAAAACCGGCATGCCGTCGCCTTTAATCAATTTCTGAACAGGGATATAATAATGACCAAGAGTCT GTTTAATACACTTCACCGTTTAACCTCAACTTCCACAGCGAACGAGTTAACAAAGCACACTCCTGAGCAATTACTTGTCT GGGCGCAAGGATGTATGCTTGAAGGCTTACCGGACCAATTTTATGAAGCCTTTATTGAATGCATCCAGTGCCAGACTGAA GACGGAAAACAAAGGCTAGACATTTCTCATAAATTTAAGATAGCCGCTGATTCTGAGTATCAGAATTTCCAACCTGCAGA TGACTTATATCCTGCCCAATGTATAGAACAAGCCCTTGAAGGAAAACAATGGAGCAAAGCGAGATTAACATTTAGCCCTG ATAACGCATCTTTTTCATGGCAGTAA
Upstream 100 bases:
>100_bases TTGAAATATCGATTATATTAACTTCAATGAGTTGCTTCACCTGAGATTTATATTCTTTAGATAAAGCGGCTTGTTTTTGT TGATTAAAGATTAAAAATGT
Downstream 100 bases:
>100_bases TAATATATATGTACGATTCCATCTGAGATTTCCCATACCCGTTTCACCCACTAAATACTGACATCAACAATTACGTCGTT GACCAAAAATGAAACTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLVKFKNRHAVAFNQFLNRDIIMTKSLFNTLHRLTSTSTANELTKHTPEQLLVWAQGCMLEGLPDQFYEAFIECIQCQTE DGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALEGKQWSKARLTFSPDNASFSWQ
Sequences:
>Translated_141_residues MLVKFKNRHAVAFNQFLNRDIIMTKSLFNTLHRLTSTSTANELTKHTPEQLLVWAQGCMLEGLPDQFYEAFIECIQCQTE DGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALEGKQWSKARLTFSPDNASFSWQ >Mature_141_residues MLVKFKNRHAVAFNQFLNRDIIMTKSLFNTLHRLTSTSTANELTKHTPEQLLVWAQGCMLEGLPDQFYEAFIECIQCQTE DGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALEGKQWSKARLTFSPDNASFSWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16309; Mature: 16309
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKFKNRHAVAFNQFLNRDIIMTKSLFNTLHRLTSTSTANELTKHTPEQLLVWAQGCML CEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCC EGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALE CCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHC GKQWSKARLTFSPDNASFSWQ CCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MLVKFKNRHAVAFNQFLNRDIIMTKSLFNTLHRLTSTSTANELTKHTPEQLLVWAQGCML CEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCC EGLPDQFYEAFIECIQCQTEDGKQRLDISHKFKIAADSEYQNFQPADDLYPAQCIEQALE CCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHC GKQWSKARLTFSPDNASFSWQ CCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA